RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 FBXO10Q9UK96 956 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 SNX10Q9Y5X0 201 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 ZFHX2Q9C0A1 2572 aaPredicted RBP25.68■■□□□ 1.7
USP48-214ENST00000532737 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.68■■□□□ 1.7
USP48-214ENST00000532737 NCAM2O15394 837 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 TBL1XO60907 577 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 PSMA2P25787 234 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 GGCXP38435 758 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 RPS24P62847 133 aaKnown RBP25.68■■□□□ 1.7
USP48-214ENST00000532737 MTA1Q13330 715 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 C14orf80Q86SX3 495 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 SFTPA1Q8IWL2 248 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 CFAP52Q8N1V2 620 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 FNIP1Q8TF40 1166 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 NUP85Q9BW27 656 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 SIK2Q9H0K1 926 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 FAM86C1Q9NVL1 165 aa25.68■■□□□ 1.7
USP48-214ENST00000532737 KAT7O95251 611 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 ADRA1BP35368 520 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 AUHQ13825 339 aaKnown RBP25.67■■□□□ 1.7
USP48-214ENST00000532737 DGKKQ5KSL6 1271 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 MPP7Q5T2T1 576 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 RNF43Q68DV7 783 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 GRAMD4Q6IC98 578 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 FBXL22Q6P050 247 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 TMTC1Q8IUR5 882 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 CCDC170Q8IYT3 715 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 HJURPQ8NCD3 748 aaPredicted RBP25.67■■□□□ 1.7
USP48-214ENST00000532737 CTNNBL1Q8WYA6 563 aaPredicted RBP25.67■■□□□ 1.7
USP48-214ENST00000532737 STIM2Q9P246 746 aa25.67■■□□□ 1.7
USP48-214ENST00000532737 CFAP54Q96N23 3096 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 A0A0A0MRY4 1105 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 ANTXRLA6NF34 631 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 SOWAHDA6NJG2 315 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 F5H5T6 163 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 K7EQS6 105 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 TMEM253P0C7T8 217 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 GRIA2P42262 883 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 NUBP1P53384 320 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 LRRC32Q14392 662 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 ARFGAP1Q8N6T3 406 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 CCDC185Q8N715 623 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 HAPLN3Q96S86 360 aa25.66■■□□□ 1.7
USP48-214ENST00000532737 LCA5LO95447 670 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 APODP05090 189 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 RPS9P46781 194 aaKnown RBP25.65■■□□□ 1.7
USP48-214ENST00000532737 DGKGP49619 791 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 SCYL2Q6P3W7 929 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 Q6ZS52 159 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 IGSF8Q969P0 613 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 C1orf74Q96LT6 269 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 SLC2A11Q9BYW1 496 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 MAGEB5Q9BZ81 275 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 VANGL2Q9ULK5 521 aa25.65■■□□□ 1.7
USP48-214ENST00000532737 GALR2O43603 387 aaPredicted RBP25.64■■□□□ 1.7
USP48-214ENST00000532737 IRAK1P51617 712 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 GAS6Q14393 721 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 ARTNQ5T4W7 220 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 TMEM139Q8IV31 216 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 ZNF683Q8IZ20 524 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 TERB1Q8NA31 727 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 NTAN1Q96AB6 310 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 BTBD6Q96KE9 485 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 BAG1Q99933 345 aaPredicted RBP25.64■■□□□ 1.7
USP48-214ENST00000532737 IRF2BPLQ9H1B7 796 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 CHRDQ9H2X0 955 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 CTTNBP2NLQ9P2B4 639 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 ANAPC7Q9UJX3 599 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 SLC27A6Q9Y2P4 619 aa25.64■■□□□ 1.7
USP48-214ENST00000532737 EPN1Q9Y6I3 576 aaPredicted RBP25.64■■□□□ 1.7
USP48-214ENST00000532737 TBC1D3BA6NDS4 549 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 GOLGA6L6A8MZA4 724 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 DESP17661 470 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 CYLC1P35663 651 aaPredicted RBP25.63■■□□□ 1.69
USP48-214ENST00000532737 ARL13BQ3SXY8 428 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 C10orf76Q5T2E6 689 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 RAD9BQ6WBX8 426 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 CIR1Q86X95 450 aaPredicted RBP25.63■■□□□ 1.69
USP48-214ENST00000532737 SYNPOQ8N3V7 929 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 ZNF564Q8TBZ8 553 aaPredicted RBP25.63■■□□□ 1.69
USP48-214ENST00000532737 WFDC5Q8TCV5 224 aa25.63■■□□□ 1.69
USP48-214ENST00000532737 RPRD1AQ96P16 312 aaPredicted RBP25.63■■□□□ 1.69
USP48-214ENST00000532737 TYW5A2RUC4 315 aaKnown RBP25.62■■□□□ 1.69
USP48-214ENST00000532737 EIF3CLB5ME19 914 aaKnown RBP25.62■■□□□ 1.69
USP48-214ENST00000532737 PRRT4C9JH25 899 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 H0Y858 1186 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 RNF40O75150 1001 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 NDUFA10O95299 355 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 MAGEA1P43355 309 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 TNFRSF4P43489 277 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 GEN1Q17RS7 908 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 C5orf22Q49AR2 442 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 FBXO43Q4G163 708 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 PREPLQ4J6C6 727 aaPredicted RBP25.62■■□□□ 1.69
USP48-214ENST00000532737 RABGAP1LQ5R372 815 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 SLFN11Q7Z7L1 901 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 DTWD2Q8NBA8 298 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 ATOH1Q92858 354 aaPredicted RBP25.62■■□□□ 1.69
USP48-214ENST00000532737 EIF3CQ99613 913 aaKnown RBP25.62■■□□□ 1.69
USP48-214ENST00000532737 UVRAGQ9P2Y5 699 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms