RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 STK39Q9UEW8 545 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 NDRG2Q9UN36 371 aaKnown RBP16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 APOBEC2Q9Y235 224 aaKnown RBP16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 PAGE1O75459 146 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 ST13P5Q8NFI4 369 aaPredicted RBP16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 MYOCQ99972 504 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 POLR1EQ9GZS1 481 aaKnown RBP16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 VPS9D1Q9Y2B5 631 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 ENPP3O14638 875 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 CDH16O75309 829 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 TYMPP19971 482 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 PLCL1Q15111 1095 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 CCNI2Q6ZMN8 369 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 TMCO2Q7Z6W1 182 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 NCF1BA6NI72 391 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 NCF1CA8MVU1 366 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 NDUFS2O75306 463 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 SPAG6O75602 509 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 NCF1P14598 390 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 RFC2P35250 354 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 DBN1Q16643 649 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 IRF2BP2Q7Z5L9 587 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 OR6K2Q8NGY2 324 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 LUC7L3O95232 432 aaKnown RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 SNRPAP09012 282 aaKnown RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 IQCF3P0C7M6 154 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 VCLP18206 1134 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 NR2C2P49116 596 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 HIC1Q14526 733 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 CES3Q6UWW8 571 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 FRMD8Q9BZ67 464 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 FOXP3Q9BZS1 431 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 DEC1Q9P2X7 70 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 FRMD3A2A2Y4 597 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 CCDC160A6NGH7 325 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 BUD23O43709 281 aaKnown RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 GLP2RO95838 553 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 CYP1A2P05177 515 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 FAM133BQ5BKY9 247 aaKnown RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 ACTRT1Q8TDG2 376 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 AGO3Q9H9G7 860 aaKnown RBP16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 FAM153AQ9UHL3 310 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC13A4Q9UKG4 626 aa16.11■□□□□ 0.17
PPFIA1-222ENST00000532504 FGF18O76093 207 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 FGF19O95750 216 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 PFKMP08237 780 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 GJA1P17302 382 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 ERCC2P18074 760 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 NRIP1P48552 1158 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 SNRPD1P62314 119 aaKnown RBP16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC29A2Q14542 456 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 SOWAHAQ2M3V2 549 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 RFX8Q6ZV50 586 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 GLT6D1Q7Z4J2 308 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 CPQQ9Y646 472 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 A0A1W2PRU2 124 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 TXNDC9O14530 226 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 MZF1P28698 734 aaPredicted RBP16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 MAXP61244 160 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 ZCWPW2Q504Y3 356 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 TRIM49D1C9J1S8 452 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 FLT3P36888 993 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 SCAMP5Q8TAC9 235 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 VPS26AO75436 327 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 MAPK9P45984 424 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 PPP2R2AP63151 447 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 IRF5Q13568 498 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 C11orf96Q7Z7L8 435 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 CASKIN2Q8WXE0 1202 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 SPATA16Q9BXB7 569 aa16.1■□□□□ 0.17
PPFIA1-222ENST00000532504 KIAA0100Q14667 2235 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 MSH3P20585 1137 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 CD86P42081 329 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 CDH17Q12864 832 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 MARK2Q7KZI7 788 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 OXCT2Q9BYC2 517 aaPredicted RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 BAIAP2L1Q9UHR4 511 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 APOC4-APOC2K7ER74 178 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 OPHN1O60890 802 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 APOC2P02655 101 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 POLR2LP62875 67 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 TRMT11Q7Z4G4 463 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 PPP1R16AQ96I34 528 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 TGS1Q96RS0 853 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 HNRNPABQ99729 332 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 WWOXQ9NZC7 414 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 PKD2L2Q9NZM6 624 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 A0A0U1RQJ8 604 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 ARHGAP10A1A4S6 786 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 GOLGA8TH3BQL2 631 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms