RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PACSIN1Q9BY11 444 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 LRRC40Q9H9A6 602 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 TBC1D14Q9P2M4 693 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 Q9Y3F1 56 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 VEGFBP49765 207 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CNGA2Q16280 664 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ZC3H12AQ5D1E8 599 aaKnown RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 C9orf57Q5W0N0 161 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 NYAP1Q6ZVC0 841 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ARMC2Q8NEN0 867 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 TMEM159Q96B96 161 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 NLNQ9BYT8 704 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 SPASTQ9UBP0 616 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 MYOM1P52179 1685 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ATRNL1Q5VV63 1379 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 DNTTP04053 509 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 HSD17B3P37058 310 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF571Q7Z3V5 609 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF555Q8NEP9 628 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CASKIN2Q8WXE0 1202 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ERP27Q96DN0 273 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 PABPC3Q9H361 631 aaKnown RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 TMEM161AQ9NX61 479 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 RNF112Q9ULX5 631 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 AIM2O14862 343 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 FGF10O15520 208 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 GLRA3O75311 464 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 NFATC1O95644 943 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 IL1BP01584 269 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 SAPCD2Q86UD0 394 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF513Q8N8E2 541 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 SEC16BQ96JE7 1060 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 NIFKQ9BYG3 293 aaKnown RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 KCTD10Q9H3F6 313 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 DCDC2Q9UHG0 476 aa11.57□□□□□ -0.56
PTPRK-221ENST00000532331 CDV3Q9UKY7 258 aaKnown RBP11.57□□□□□ -0.56
PTPRK-221ENST00000532331 ABHD14A-ACY1A0A1B0GW23 586 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 TIMM44O43615 452 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 TLR5O60602 858 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 LSP1P33241 339 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 IFNEQ86WN2 208 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ANKRD52Q8NB46 1076 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 FBXO36Q8NEA4 188 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 GPR152Q8TDT2 470 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ABTB1Q969K4 478 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CAPN10Q9HC96 672 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF214Q9UL59 606 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 SMIM28A0A1B0GU29 152 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 AKAP10O43572 662 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 PPP1R11O60927 126 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 RPN2P04844 631 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 PTPN2P17706 415 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ACTN3Q08043 901 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 PIGZQ86VD9 579 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 COLGALT1Q8NBJ5 622 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ACTRT1Q8TDG2 376 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 OTULINQ96BN8 352 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 KLC4Q9NSK0 619 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 FKBP9O95302 570 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 SERPINB8P50452 374 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 TMED1Q13445 227 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 AASDHQ4L235 1098 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 FKBP9P1Q75LS8 142 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 TDRD5Q8NAT2 981 aaKnown RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CCDC126Q96EE4 140 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 RAD18Q9NS91 495 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 MMP13P45452 471 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ZBTB17Q13105 803 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 TRPM8Q7Z2W7 1104 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CEP70Q8NHQ1 597 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 FAM162AQ96A26 154 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 OLFM3Q96PB7 478 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 WDR41Q9HAD4 459 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF556Q9HAH1 456 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 C6orf203Q9P0P8 240 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CFAP97Q9P2B7 532 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CAPN6Q9Y6Q1 641 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 EVPLLA8MZ36 301 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 PSMD12O00232 456 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 PDE2AO00408 941 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ADRB2P07550 413 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 AMPD1P23109 780 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 MAPK8P45983 427 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 DDX39BQ13838 428 aaKnown RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 CNGA3Q16281 694 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 ANKS6Q68DC2 871 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 TNIP2Q8NFZ5 429 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 C17orf80Q9BSJ5 609 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 POLR1EQ9GZS1 481 aaKnown RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 MAFBQ9Y5Q3 323 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 MRPL42Q9Y6G3 142 aaKnown RBP11.56□□□□□ -0.56
PTPRK-221ENST00000532331 DUSP10Q9Y6W6 482 aa11.56□□□□□ -0.56
PTPRK-221ENST00000532331 RFC2P35250 354 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms