RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 TBC1D3Q8IZP1 549 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SHC3Q92529 594 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 FCRL2Q96LA5 508 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 C5P01031 1676 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 DUOX1Q9NRD9 1551 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SMAPO00193 183 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 RARAP10276 462 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 FNTAP49354 379 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 NPY5RQ15761 445 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 HIST2H2ACQ16777 129 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 ANKRD20A8PQ5CZ79 823 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 MORN1Q5T089 497 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 HIST2H2AA3Q6FI13 130 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 MAMDC4Q6UXC1 1216 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 C12orf56Q8IXR9 622 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 C10orf67Q8IYJ2 551 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 MYO1HQ8N1T3 1032 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 FBXO36Q8NEA4 188 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 RAD9AQ99638 391 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SNRNP25Q9BV90 132 aaKnown RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 IL23AQ9NPF7 189 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 SAE1Q9UBE0 346 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-230ENST00000532245 STXBP5LQ9Y2K9 1186 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 CPQQ9Y646 472 aa8.16□□□□□ -1.1
CTNND1-230ENST00000532245 FAM237AA0A1B0GTK4 181 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 USP12O75317 370 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PAGE1O75459 146 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 EPHX1P07099 455 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 ERVK-10P10266 1014 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 GJA1P17302 382 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 MATKP42679 507 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 TMCO2Q7Z6W1 182 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 TRAPPC5Q8IUR0 188 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PDCD7Q8N8D1 485 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PDLIM2Q96JY6 352 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 LPIN3Q9BQK8 851 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 ZCWPW1Q9H0M4 648 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PSMC3IPQ9P2W1 217 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FAM153AQ9UHL3 310 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 MRPS17Q9Y2R5 130 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 SLC38A8A6NNN8 435 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 EPHB6O15197 1021 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PPFIA2O75334 1257 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 H2AFYO75367 372 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 DAB1O75553 588 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 ERBB2P04626 1255 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 IQCF3P0C7M6 154 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 MYL2P10916 166 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PTPN7P35236 360 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 C21orf59P57076 290 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 POU4F1Q01851 419 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 DAB2IPQ5VWQ8 1189 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 C11orf63Q6NUN7 778 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 PKN3Q6P5Z2 889 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FBXO38Q6PIJ6 1188 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 RFWD2Q8NHY2 731 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 KCNK16Q96T55 309 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 CCDC3Q9BQI4 270 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 C16orf70Q9BSU1 422 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 RHOBTB2Q9BYZ6 727 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 AVENQ9NQS1 362 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 MAN1C1Q9NR34 630 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FLRT1Q9NZU1 646 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 KIAA1522Q9P206 1035 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 RNF112Q9ULX5 631 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 NOL3O60936 208 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 HSPA8P11142 646 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FSHRP23945 695 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 CD86P42081 329 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 SLC11A1P49279 550 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 RAP1GDS1P52306 607 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 SESN3P58005 492 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FMO1Q01740 532 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FAM133BQ5BKY9 247 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FAM46CQ5VWP2 391 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 RAET1GQ6H3X3 334 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 NPNTQ6UXI9 565 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 OR8D1Q8WZ84 308 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 TMEM159Q96B96 161 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 NKX2-4Q9H2Z4 354 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 VCX3BQ9H321 246 aa8.15□□□□□ -1.1
CTNND1-230ENST00000532245 DRG1Q9Y295 367 aaKnown RBP8.15□□□□□ -1.1
CTNND1-230ENST00000532245 FRMD3A2A2Y4 597 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 ENPP3O14638 875 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 BUD23O43709 281 aaKnown RBP8.15□□□□□ -1.11
CTNND1-230ENST00000532245 SPAG6O75602 509 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 GOT1P17174 413 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 TYMPP19971 482 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 NR2C2P49116 596 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 IFT88Q13099 833 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 MORF4L2Q15014 288 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 ACAP1Q15027 740 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 TRMT10CQ7L0Y3 403 aaKnown RBP8.15□□□□□ -1.11
CTNND1-230ENST00000532245 SLC26A7Q8TE54 656 aa8.15□□□□□ -1.11
CTNND1-230ENST00000532245 ELAC2Q9BQ52 826 aaKnown RBP8.15□□□□□ -1.11
CTNND1-230ENST00000532245 UNKQ9C0B0 810 aaKnown RBP8.15□□□□□ -1.11
CTNND1-230ENST00000532245 KDM4CQ9H3R0 1056 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms