RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PPP3CCP48454 512 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
CHD7-211ENST00000532149 SLC5A3P53794 718 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 IL9RQ01113 521 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 CAP1Q01518 475 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 RING1Q06587 406 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 GALNT2Q10471 571 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 IKBKEQ14164 716 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 PRPSAP1Q14558 356 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 CTXN3Q4LDR2 81 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 ANKRD20A2Q5SQ80 823 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 ANKRD20A1Q5TYW2 823 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
CHD7-211ENST00000532149 ANKRD20A3Q5VUR7 823 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 OTUD1Q5VV17 481 aaPredicted RBP12.65□□□□□ -0.38
CHD7-211ENST00000532149 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 NPNTQ6UXI9 565 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 BHLHA9Q7RTU4 235 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 CPLX4Q7Z7G2 160 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 TAX1BP1Q86VP1 789 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 FBXO36Q8NEA4 188 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 OR10T2Q8NGX3 314 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 DYDC1Q8WWB3 177 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
CHD7-211ENST00000532149 CDKL2Q92772 493 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 CASD1Q96PB1 797 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 DHRS4Q9BTZ2 278 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 TKTL2Q9H0I9 626 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 TLR8Q9NR97 1041 aaKnown RBP12.65□□□□□ -0.38
CHD7-211ENST00000532149 GPATCH2LQ9NWQ4 482 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 TTC3P53804 2025 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 FAM47DPA6NHR8 397 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 CREB3O43889 395 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 NBNO60934 754 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 KRT38O76015 456 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 SUN1O94901 812 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 APRTP07741 180 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 INHBAP08476 426 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 SRGAP2BP0DMP2 458 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 CHN1P15882 459 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 ERCC2P18074 760 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 KRT15P19012 456 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 TFE3P19532 575 aaPredicted RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 PRKCHP24723 683 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 ALDH7A1P49419 539 aaKnown RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 GUCY1A3Q02108 690 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 GBE1Q04446 702 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 ANO4Q32M45 955 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 BBS9Q3SYG4 887 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 SLC39A12Q504Y0 691 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 TRABD2AQ86V40 505 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 LRRTM3Q86VH5 581 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 SLC26A11Q86WA9 606 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 LRRC6Q86X45 466 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 ZNF280BQ86YH2 543 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 CCDC117Q8IWD4 279 aaPredicted RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 CRIPAKQ8N1N5 446 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 ATP6V0D2Q8N8Y2 350 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 DQX1Q8TE96 717 aaKnown RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 LINC01599Q8WXQ3 324 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 TTC17Q96AE7 1141 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 EBNA1BP2Q99848 306 aaKnown RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 SELENOSQ9BQE4 189 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 ETNK1Q9HBU6 452 aa12.64□□□□□ -0.39
CHD7-211ENST00000532149 PPARGC1AQ9UBK2 798 aaKnown RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 AAR2Q9Y312 384 aaKnown RBP12.64□□□□□ -0.39
CHD7-211ENST00000532149 ABHD14A-ACY1A0A1B0GW23 586 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 TBC1D4O60343 1298 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 TMEM63AO94886 807 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 CPP00450 1065 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 APOEP02649 317 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 YY1P25490 414 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 YWHAQP27348 245 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 EPHB2P29323 1055 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 IFNAR2P48551 515 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 NPY2RP49146 381 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 IFI35P80217 286 aaPredicted RBP12.63□□□□□ -0.39
CHD7-211ENST00000532149 CREMQ03060 361 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 AP1B1Q10567 949 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 SLC10A2Q12908 348 aaPredicted RBP12.63□□□□□ -0.39
CHD7-211ENST00000532149 DBN1Q16643 649 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 USP41Q3LFD5 358 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 TPGS2Q68CL5 300 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 SLC39A5Q6ZMH5 540 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 RGS9BPQ6ZS82 235 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 DENND5BQ6ZUT9 1274 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 CCNYQ8ND76 341 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 GABPB2Q8TAK5 448 aaPredicted RBP12.63□□□□□ -0.39
CHD7-211ENST00000532149 GSDMBQ8TAX9 411 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms