RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 SLC6A11P48066 632 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 GALK1P51570 392 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 SGSHP51688 502 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 VAV2P52735 878 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 GRSF1Q12849 480 aaKnown RBP eCLIP23.03■■□□□ 1.28
LRRK1-208ENST00000532029 TCEAL1Q15170 157 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 MPP7Q5T2T1 576 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 TTC39BQ5VTQ0 682 aaPredicted RBP23.03■■□□□ 1.28
LRRK1-208ENST00000532029 GRAMD4Q6IC98 578 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 FBXL22Q6P050 247 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 C12orf40Q86WS4 652 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 CCDC117Q8IWD4 279 aaPredicted RBP23.03■■□□□ 1.28
LRRK1-208ENST00000532029 ETFBKMTQ8IXQ9 262 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 PBXIP1Q96AQ6 731 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 PDLIM2Q96JY6 352 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 RPRD1AQ96P16 312 aaPredicted RBP23.03■■□□□ 1.28
LRRK1-208ENST00000532029 DESI2Q9BSY9 194 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 PCSK1NQ9UHG2 260 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 SNX10Q9Y5X0 201 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 SHISA7A6NL88 538 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 TMEM110-MUSTN1A8MSY1 372 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 PROSCO94903 275 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 PDGFBP01127 241 aaPredicted RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 HOXD9P28356 352 aaPredicted RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 ARHGAP25P42331 645 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 SSR1P43307 286 aaKnown RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 RPS24P62847 133 aaKnown RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 KDSRQ06136 332 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 SCAPQ12770 1279 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 MESDQ14696 234 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 NAIF1Q69YI7 327 aaPredicted RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 SUGP1Q8IWZ8 645 aaKnown RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 CFAP52Q8N1V2 620 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 ARFGAP1Q8N6T3 406 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 ZNF557Q8N988 423 aaPredicted RBP23.02■■□□□ 1.28
LRRK1-208ENST00000532029 MYEOVQ96EZ4 313 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 FOXQ1Q9C009 403 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 OSBPL2Q9H1P3 480 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 ARHGEF4Q9NR80 690 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 FZD10Q9ULW2 581 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 TFR2Q9UP52 801 aa23.02■■□□□ 1.28
LRRK1-208ENST00000532029 A0A0A6YYK5 440 aaPredicted RBP23.01■■□□□ 1.27
LRRK1-208ENST00000532029 FAM170BA6NMN3 283 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 NCAM2O15394 837 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 APODP05090 189 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 DRD1P21728 446 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 TARSP26639 723 aaKnown RBP23.01■■□□□ 1.27
LRRK1-208ENST00000532029 DGKGP49619 791 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 TMEM196Q5HYL7 178 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 C14orf80Q86SX3 495 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 P2RY11Q96G91 374 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 SLC2A11Q9BYW1 496 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 OR12D3Q9UGF7 316 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 USP18Q9UMW8 372 aa23.01■■□□□ 1.27
LRRK1-208ENST00000532029 E9PAM4 449 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 SRGAP2O75044 1071 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 MAN1A1P33908 653 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 CCZ1BP86790 482 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 CCZ1P86791 482 aaPredicted RBP23■■□□□ 1.27
LRRK1-208ENST00000532029 LRRC32Q14392 662 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 HADHQ16836 314 aaKnown RBP23■■□□□ 1.27
LRRK1-208ENST00000532029 ERMARDQ5T6L9 678 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 DAB2IPQ5VWQ8 1189 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 NUDT18Q6ZVK8 323 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 MFN1Q8IWA4 741 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 CARNMT1Q8N4J0 409 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 PJA1Q8NG27 643 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 IGSF8Q969P0 613 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 OSBPL6Q9BZF3 934 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 AP4E1Q9UPM8 1137 aa23■■□□□ 1.27
LRRK1-208ENST00000532029 RCCD1A6NED2 376 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 FAM86C2PA6NEL3 165 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 PJA2O43164 708 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 LUC7L3O95232 432 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 KAT7O95251 611 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 GRIA2P42262 883 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 HADHBP55084 474 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 NRG1Q02297 640 aaPredicted RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 KIF5AQ12840 1032 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 CDH18Q13634 790 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 CWF19L1Q69YN2 538 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 FSTL4Q6MZW2 842 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 BMP8AQ7Z5Y6 402 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 CALR3Q96L12 384 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 PEBP4Q96S96 227 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 SNRNP25Q9BV90 132 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 C1QTNF1Q9BXJ1 281 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 DHX35Q9H5Z1 703 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 FBRSL1Q9HCM7 1045 aaKnown RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 FBXO10Q9UK96 956 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 SIT1Q9Y3P8 196 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 MTF2Q9Y483 593 aaPredicted RBP22.99■■□□□ 1.27
LRRK1-208ENST00000532029 ADGRG1Q9Y653 693 aa22.99■■□□□ 1.27
LRRK1-208ENST00000532029 A0A1B0GVM2 712 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 TCAF2A6NFQ2 919 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 BTNL10A8MVZ5 291 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 H0Y626 953 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 TRIM24O15164 1050 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 NAP1L1P55209 391 aaKnown RBP22.98■■□□□ 1.27
LRRK1-208ENST00000532029 C5orf22Q49AR2 442 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms