RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 CNGA4Q8IV77 575 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 KIAA1958Q8N8K9 716 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 TXNDC5Q8NBS9 432 aaKnown RBP19.35■□□□□ 0.69
PUF60-218ENST00000531995 CCDC26Q8TAB7 109 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 RNF139Q8WU17 664 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 NACA2Q9H009 215 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 GRPEL1Q9HAV7 217 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 CALCOCO1Q9P1Z2 691 aa19.35■□□□□ 0.69
PUF60-218ENST00000531995 SLC12A8A0AV02 714 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 E2F8A0AVK6 867 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 BCLAF3A2AJT9 711 aaKnown RBP19.34■□□□□ 0.69
PUF60-218ENST00000531995 PATE3B3GLJ2 98 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 TM4SF5O14894 197 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 MSI1O43347 362 aaKnown RBP19.34■□□□□ 0.69
PUF60-218ENST00000531995 RTN2O75298 545 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 DAB1O75553 588 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 IGLV3-27P01718 113 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 APODP05090 189 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 CHRM1P11229 460 aaPredicted RBP19.34■□□□□ 0.69
PUF60-218ENST00000531995 CRY1Q16526 586 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 USP39Q53GS9 565 aaKnown RBP19.34■□□□□ 0.69
PUF60-218ENST00000531995 LY6G5CQ5SRR4 150 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 PPP1R15BQ5SWA1 713 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 FAM102AQ5T9C2 384 aaPredicted RBP19.34■□□□□ 0.69
PUF60-218ENST00000531995 PSAPL1Q6NUJ1 521 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 RHBDF2Q6PJF5 856 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 Q6ZNB5 142 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 TAC4Q86UU9 113 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 DDX42Q86XP3 938 aaKnown RBP eCLIP19.34■□□□□ 0.69
PUF60-218ENST00000531995 ADGRG2Q8IZP9 1017 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 MSANTD4Q8NCY6 345 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 JOSD2Q8TAC2 188 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 ADAM32Q8TC27 787 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 GOLGA1Q92805 767 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 NT5C3BQ969T7 300 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 VCPIP1Q96JH7 1222 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 PNKPQ96T60 521 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 ARHGEF4Q9NR80 690 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 MYO18AQ92614 2054 aaKnown RBP19.34■□□□□ 0.69
PUF60-218ENST00000531995 WDFY3Q8IZQ1 3526 aa19.34■□□□□ 0.69
PUF60-218ENST00000531995 CEP192Q8TEP8 1941 aa19.33■□□□□ 0.69
PUF60-218ENST00000531995 SSU72P8A0A1W2PR75 194 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 SGK1O00141 431 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 CALB1P05937 261 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 HMBSP08397 361 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 TFE3P19532 575 aaPredicted RBP19.33■□□□□ 0.68
PUF60-218ENST00000531995 FECHP22830 423 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 RRM1P23921 792 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 NOS2P35228 1153 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 FLT3P36888 993 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 MATKP42679 507 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 DHPSP49366 369 aaPredicted RBP19.33■□□□□ 0.68
PUF60-218ENST00000531995 RNASE9P60153 205 aaKnown RBP19.33■□□□□ 0.68
PUF60-218ENST00000531995 COG7P83436 770 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 DCAF6Q58WW2 860 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 EMC10Q5UCC4 262 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 ARMCX6Q7L4S7 300 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 ARCQ7LC44 396 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 BBS7Q8IWZ6 715 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 NAT16Q8N8M0 369 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 IL17RCQ8NAC3 791 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 RLN3Q8WXF3 142 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 SLC39A13Q96H72 371 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 NPY6RQ99463 290 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.33■□□□□ 0.68
PUF60-218ENST00000531995 NHEJ1Q9H9Q4 299 aaPredicted RBP19.33■□□□□ 0.68
PUF60-218ENST00000531995 METTL5Q9NRN9 209 aaKnown RBP19.33■□□□□ 0.68
PUF60-218ENST00000531995 BCCIPQ9P287 314 aaKnown RBP eCLIP19.33■□□□□ 0.68
PUF60-218ENST00000531995 WDR35Q9P2L0 1181 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 ANGPTL2Q9UKU9 493 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 SH3BP1Q9Y3L3 701 aa19.33■□□□□ 0.68
PUF60-218ENST00000531995 HBS1LQ9Y450 684 aaKnown RBP19.33■□□□□ 0.68
PUF60-218ENST00000531995 ATXN2Q99700 1313 aaKnown RBP19.32■□□□□ 0.68
PUF60-218ENST00000531995 CAPN9O14815 690 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 KCNK5O95279 499 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 PMLP29590 882 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 EIF2DP41214 584 aaKnown RBP19.32■□□□□ 0.68
PUF60-218ENST00000531995 MRPS21P82921 87 aaKnown RBP19.32■□□□□ 0.68
PUF60-218ENST00000531995 GFPT1Q06210 699 aaPredicted RBP19.32■□□□□ 0.68
PUF60-218ENST00000531995 BNIPLQ7Z465 357 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 EMC1Q8N766 993 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 FRMD1Q8N878 549 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 C3orf20Q8ND61 904 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 HMGB4Q8WW32 186 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 P2RY11Q96G91 374 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 FCRL2Q96LA5 508 aaPredicted RBP19.32■□□□□ 0.68
PUF60-218ENST00000531995 TRIM62Q9BVG3 475 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 ZNHIT6Q9NWK9 470 aaKnown RBP19.32■□□□□ 0.68
PUF60-218ENST00000531995 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.32■□□□□ 0.68
PUF60-218ENST00000531995 STRIP2Q9ULQ0 834 aa19.32■□□□□ 0.68
PUF60-218ENST00000531995 TCRBV21S2A2A0A5A6 115 aa19.31■□□□□ 0.68
PUF60-218ENST00000531995 GOLGA6L3A6NEY3 463 aa19.31■□□□□ 0.68
PUF60-218ENST00000531995 SIGLEC16A6NMB1 481 aa19.31■□□□□ 0.68
PUF60-218ENST00000531995 C4orf47A7E2U8 309 aa19.31■□□□□ 0.68
PUF60-218ENST00000531995 TRUB2O95900 331 aaKnown RBP19.31■□□□□ 0.68
PUF60-218ENST00000531995 RFC1P35251 1148 aaPredicted RBP19.31■□□□□ 0.68
PUF60-218ENST00000531995 NOVA1P51513 510 aaKnown RBP19.31■□□□□ 0.68
PUF60-218ENST00000531995 SLC18A3Q16572 532 aa19.31■□□□□ 0.68
PUF60-218ENST00000531995 TSR1Q2NL82 804 aaKnown RBP19.31■□□□□ 0.68
PUF60-218ENST00000531995 PLEKHA7Q6IQ23 1121 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms