RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ZMYM3Q14202 1370 aa4.61□□□□□ -1.67
AC055878.1-201ENST00000531858 A0A1W2PRG0 241 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TCRBV21S2A2A0A5A6 115 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 CDHR4A6H8M9 788 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 OR14I1A6ND48 311 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 KCNJ18B7U540 433 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 NDC80O14777 642 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 HLA-DOAP06340 250 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 RARGP13631 454 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 KRT4P19013 534 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 MMP8P22894 467 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 UQCRC1P31930 480 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 HTR7P34969 479 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 GCLCP48506 637 aaPredicted RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TOB1P50616 345 aaPredicted RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 MRPL12P52815 198 aaKnown RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 NPEPPSP55786 919 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TLE3Q04726 772 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 NIPAL4Q0D2K0 466 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 CBFBQ13951 182 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TRIM29Q14134 588 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 E2F2Q14209 437 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 KCNJ12Q14500 433 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TNIP1Q15025 636 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 MED22Q15528 200 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 MSMPQ1L6U9 139 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 DPCR1Q3MIW9 517 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 ZIK1Q3SY52 487 aaPredicted RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 METTL24Q5JXM2 366 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC30A9Q6PML9 568 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 MAMDC4Q6UXC1 1216 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 PIK3AP1Q6ZUJ8 805 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 DENND5BQ6ZUT9 1274 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 USP51Q70EK9 711 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 DOK3Q7L591 496 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 ZNF280BQ86YH2 543 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 WFDC3Q8IUB2 231 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 CFAP52Q8N1V2 620 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TMEM116Q8NCL8 245 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 GABPB2Q8TAK5 448 aaPredicted RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC35B2Q8TB61 432 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 DNAJB14Q8TBM8 379 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D15Q8TC07 691 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 POC1BQ8TC44 478 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 NCSTNQ92542 709 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 EXOC4Q96A65 974 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 ARRDC3Q96B67 414 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 KLHL29Q96CT2 875 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 GCNAQ96QF7 691 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 IWS1Q96ST2 819 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 THUMPD3Q9BV44 507 aaKnown RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 STRA6Q9BX79 667 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 CARD11Q9BXL7 1154 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TTYH3Q9C0H2 523 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC6A17Q9H1V8 727 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 MROH8Q9H579 483 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 C19orf44Q9H6X5 657 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TRMT1Q9NXH9 659 aaKnown RBP4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 CACNG4Q9UBN1 327 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 STEAP1Q9UHE8 339 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 LIPT1Q9Y234 373 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 SNX14Q9Y5W7 946 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 HCFC2Q9Y5Z7 792 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 SESN1Q9Y6P5 492 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 PNPLA7Q6ZV29 1317 aa4.6□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3DA0A087WVF3 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3IA0A087WXS9 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3EA0A087X179 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3KA0A087X1G2 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 hCG_1809904A0A1W2PP81 198 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 A0A1W2PPE2 198 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 A0A1W2PR64 198 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3BA6NDS4 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3FA6NER0 549 aaPredicted RBP4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 PRR19A6NJB7 356 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 C3orf70A6NLC5 250 aaPredicted RBP4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 A8MV72 311 aaPredicted RBP4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3LB9A6J9 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 ABCC9O60706 1549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 HNRNPCL1O60812 293 aaKnown RBP4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 WDR47O94967 919 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 PNPP00491 289 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 PRNPP04156 253 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 URODP06132 367 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 ABCB1P08183 1280 aaPredicted RBP4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D3HP0C7X1 549 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 CD8BP10966 210 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 ACP5P13686 325 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 IL10P22301 178 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 PTAFRP25105 342 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 MCM3P25205 808 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 HPDP32754 393 aaPredicted RBP4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 ICAM3P32942 547 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 CD86P42081 329 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 CPA2P48052 419 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 LIG4P49917 911 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 RCAN1P53805 252 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 LILRA4P59901 499 aa4.59□□□□□ -1.67
AC055878.1-201ENST00000531858 DDR1Q08345 913 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms