RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-210ENST00000531516 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
C11orf54-210ENST00000531516 TRIM61Q5EBN2 209 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 MS4A13Q5J8X5 152 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-210ENST00000531516 SYPL2Q5VXT5 272 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 KIAA1211LQ6NV74 962 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 TMPRSS6Q8IU80 811 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 LGI2Q8N0V4 545 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.03□□□□□ -0.32
C11orf54-210ENST00000531516 OR2T3Q8NH03 318 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 FIBINQ8TAL6 211 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 C18orf8Q96DM3 657 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 VPS16Q9H269 839 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 SIX2Q9NPC8 291 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 TMEM9BQ9NQ34 198 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 PLCB1Q9NQ66 1216 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 COX16Q9P0S2 106 aa13.03□□□□□ -0.32
C11orf54-210ENST00000531516 EVLQ9UI08 416 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-210ENST00000531516 IGHV1OR15-9A0A0B4J2B8 117 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 MEI4A8MW99 385 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 KCNU1A8MYU2 1149 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 GDF9O60383 454 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 LUC7L3O95232 432 aaKnown RBP13.02□□□□□ -0.33
C11orf54-210ENST00000531516 F9P00740 461 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 FYNP06241 537 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 SYPP08247 313 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 NOS2P35228 1153 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 CLCN1P35523 988 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 ZBTB16Q05516 673 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 NME3Q13232 169 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 SLC12A1Q13621 1099 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 ENPP2Q13822 863 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 FAM133BQ5BKY9 247 aaKnown RBP13.02□□□□□ -0.33
C11orf54-210ENST00000531516 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.33
C11orf54-210ENST00000531516 SLC26A9Q7LBE3 791 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 ERLEC1Q96DZ1 483 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 SLC2A13Q96QE2 648 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 CYTH4Q9UIA0 394 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
C11orf54-210ENST00000531516 HCN2Q9UL51 889 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 CLEC4EQ9ULY5 219 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 FHOD1Q9Y613 1164 aa13.02□□□□□ -0.33
C11orf54-210ENST00000531516 F8VZ95 297 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 M0QYT0 321 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 DAB1O75553 588 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 GRAP2O75791 330 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 DNTTP04053 509 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 TACR2P21452 398 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SLC6A4P31645 630 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SCNN1AP37088 669 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 STAT1P42224 750 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 MATKP42679 507 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 PTGER3P43115 390 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
C11orf54-210ENST00000531516 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SULT2A1Q06520 285 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 KRT31Q15323 416 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 PPM1JQ5JR12 505 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 TAF3Q5VWG9 929 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 HDDC3Q8N4P3 179 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 WDTC1Q8N5D0 677 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 KDM1BQ8NB78 822 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-210ENST00000531516 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 GANCQ8TET4 914 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 CYB5D2Q8WUJ1 264 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SORCS1Q8WY21 1168 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 HSPA12BQ96MM6 686 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 NUCKS1Q9H1E3 243 aaKnown RBP13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SMOC1Q9H4F8 434 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 WDCPQ9H6R7 721 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 ITM2CQ9NQX7 267 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SCML1Q9UN30 329 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 SLC6A14Q9UN76 642 aa13.01□□□□□ -0.33
C11orf54-210ENST00000531516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13□□□□□ -0.33
C11orf54-210ENST00000531516 C4orf47A7E2U8 309 aa13□□□□□ -0.33
C11orf54-210ENST00000531516 SRPRAP08240 638 aaKnown RBP13□□□□□ -0.33
C11orf54-210ENST00000531516 DESP17661 470 aa13□□□□□ -0.33
C11orf54-210ENST00000531516 ITPKAP23677 461 aa13□□□□□ -0.33
C11orf54-210ENST00000531516 PRKCHP24723 683 aa13□□□□□ -0.33
C11orf54-210ENST00000531516 CD70P32970 193 aa13□□□□□ -0.33
C11orf54-210ENST00000531516 TPMTP51580 245 aa13□□□□□ -0.33
C11orf54-210ENST00000531516 POLR2FP61218 127 aaKnown RBP13□□□□□ -0.33
C11orf54-210ENST00000531516 UBXN1Q04323 297 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms