RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 SLC30A1Q9Y6M5 507 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 E7ESA3 106 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 ZBTB5O15062 677 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 KCNA2P16389 499 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 GRK2P25098 689 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 QARSP47897 775 aaKnown RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 IFITM3Q01628 133 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 PTP4A2Q12974 167 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 DPP8Q6V1X1 898 aaPredicted RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 FAM178BQ8IXR5 827 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 UBR7Q8N806 425 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 SUN5Q8TC36 379 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 B3GNT3Q9Y2A9 372 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 SRCAPQ6ZRS2 3230 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 EIF3DO15371 548 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCF11-204ENST00000530660 GABBR2O75899 941 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 EIF2S1P05198 315 aaKnown RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 UBL4AP11441 157 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 RPL22P35268 128 aaKnown RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 GNL1P36915 607 aaPredicted RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 NOVP48745 357 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 GPC3P51654 580 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 GSTO1P78417 241 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 EN1Q05925 392 aaPredicted RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 ZNF720Q7Z2F6 126 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 CYP2U1Q7Z449 544 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 AGR3Q8TD06 166 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 PPP1R36Q96LQ0 422 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 ZNF641Q96N77 438 aaPredicted RBP14.5□□□□□ -0.09
PCF11-204ENST00000530660 C11orf70Q9BRQ4 267 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 NANOGQ9H9S0 305 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 ANKMY1Q9P2S6 941 aa14.5□□□□□ -0.09
PCF11-204ENST00000530660 SNAP91O60641 907 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 CLASP2O75122 1294 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 KRT37O76014 449 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 BCL10O95999 233 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 NAT2P11245 290 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 ARL1P40616 181 aaPredicted RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 PSMC5P62195 406 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 AGAP7PQ5VUJ5 663 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 TAS2R42Q7RTR8 314 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 ADGRF2Q8IZF7 708 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 ZNF420Q8TAQ5 688 aaPredicted RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 FIZ1Q96SL8 496 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 MTG1Q9BT17 334 aaPredicted RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 DUS2Q9NX74 493 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 MSI1O43347 362 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 AMHP03971 560 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 AP3M2P53677 418 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 C4orf22Q6V702 233 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 PRR23BQ6ZRT6 265 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 TTC39CQ8N584 583 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 CYP2W1Q8TAV3 490 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 FAM84AQ96KN4 292 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 ANKRD60Q9BZ19 345 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 NOL11Q9H8H0 719 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 RAB20Q9NX57 234 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 PPP1R1BQ9UD71 204 aaPredicted RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 ZNF536O15090 1300 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 FAM86B1E9PN63 330 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 SPAG6O75602 509 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 GSRP00390 522 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 FAM86B2P0C5J1 330 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 CCNA2P20248 432 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 MATN1P21941 496 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 CXCR2P25025 360 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 UBE2UQ5VVX9 321 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 MBLAC2Q68D91 279 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 DRICH1Q6PGQ1 229 aaPredicted RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 BRINP3Q76B58 766 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 GOLM1Q8NBJ4 401 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 ADAMTS16Q8TE57 1224 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 CBWD1Q9BRT8 395 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 STN1Q9H668 368 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 GPRC5CQ9NQ84 441 aa14.49□□□□□ -0.09
PCF11-204ENST00000530660 NXF1Q9UBU9 619 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 CNOT11Q9UKZ1 510 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 DRG1Q9Y295 367 aaKnown RBP14.49□□□□□ -0.09
PCF11-204ENST00000530660 ZNF195O14628 629 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 TIMM44O43615 452 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 CLPXO76031 633 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 CFHP08603 1231 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 FGF3P11487 239 aaPredicted RBP14.48□□□□□ -0.09
PCF11-204ENST00000530660 UNGP13051 313 aaPredicted RBP14.48□□□□□ -0.09
PCF11-204ENST00000530660 MX2P20592 715 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 PRKACBP22694 351 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 MFAP3P55082 362 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 ODR4Q5SWX8 454 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 KYQ8NBH2 561 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 EIF2AK1Q9BQI3 630 aaKnown RBP14.48□□□□□ -0.09
PCF11-204ENST00000530660 C1orf50Q9BV19 199 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 ZNF341Q9BYN7 854 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 NOL6Q9H6R4 1146 aaKnown RBP14.48□□□□□ -0.09
PCF11-204ENST00000530660 ZNF652Q9Y2D9 606 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 DGKBQ9Y6T7 804 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
PCF11-204ENST00000530660 GOLGA8QA0A0J9YX86 632 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms