RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 KRT39Q6A163 491 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 IQCEQ6IPM2 695 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 USP37Q86T82 979 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 TXNDC5Q8NBS9 432 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 SEMA4DQ92854 862 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 B3GALT6Q96L58 329 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 ZNF560Q96MR9 790 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 NAT10Q9H0A0 1025 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 TLR9Q9NR96 1032 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 KPNA7A9QM74 516 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 TBC1D4O60343 1298 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 STX10O60499 249 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 CAVIN2O95810 425 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 AFPP02771 609 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 THBDP07204 575 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 KRT19P08727 400 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 CTSAP10619 480 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 ATP1A3P13637 1013 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 EEF1GP26641 437 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 TKTP29401 623 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 ITGA1P56199 1179 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 MYL7Q01449 175 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 DSG1Q02413 1049 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 KRT17Q04695 432 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 ELAVL2Q12926 359 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 BIRC3Q13489 604 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 KRT31Q15323 416 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 PPP2R5EQ16537 467 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 TPD52L1Q16890 204 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 SV2CQ496J9 727 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 TCP11X2Q5H9J9 407 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 FAM171A1Q5VUB5 890 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 LUZP1Q86V48 1076 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 FAM114A1Q8IWE2 563 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 GPR65Q8IYL9 337 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 VPS52Q8N1B4 723 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 AUTS2Q8WXX7 1259 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 MRPL38Q96DV4 380 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 HPDLQ96IR7 371 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 SENP8Q96LD8 212 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 CDK5RAP1Q96SZ6 601 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 RTP3Q9BQQ7 232 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 MMRN2Q9H8L6 949 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 APOBEC3GQ9HC16 384 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 GDAP2Q9NXN4 497 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 LIMA1Q9UHB6 759 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 L1RE1Q9UN81 338 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 EMC9Q9Y3B6 208 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 NUB1Q9Y5A7 615 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 MTCH2Q9Y6C9 303 aa9.34□□□□□ -0.91
CCDC90B-217ENST00000530253 TCF20Q9UGU0 1960 aaKnown RBP9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 HIDE1A8MVS5 230 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 C22orf46C9J442 243 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 SYN3O14994 580 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 P4HA2O15460 535 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 KCNH1O95259 989 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TYMPP19971 482 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 ATICP31939 592 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 PIK3CAP42336 1068 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 GLUD2P49448 558 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TFF2Q03403 129 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 ZNF699Q32M78 642 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 USP41Q3LFD5 358 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 PLPP4Q5VZY2 271 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 SPOPLQ6IQ16 392 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 KIAA1211LQ6NV74 962 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 DPY19L2P1Q6NXN4 242 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 RSPO2Q6UXX9 243 aaPredicted RBP9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 OSTM1Q86WC4 334 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 SLC16A11Q8NCK7 471 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 BVESQ8NE79 360 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 FBXL13Q8NEE6 735 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 LNX1Q8TBB1 728 aaPredicted RBP9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 KBTBD7Q8WVZ9 684 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TAF4BQ92750 862 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TCF25Q9BQ70 676 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TUBGCP2Q9BSJ2 902 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 YIPF4Q9BSR8 244 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 PI4K2AQ9BTU6 479 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TTPALQ9BTX7 342 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 SDCBP2Q9H190 292 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TSPY26PQ9H489 355 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 TAB2Q9NYJ8 693 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 MTRRQ9UBK8 725 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 STK39Q9UEW8 545 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 NME7Q9Y5B8 376 aa9.33□□□□□ -0.92
CCDC90B-217ENST00000530253 GTPBP10A4D1E9 387 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 SMTNL1A8MU46 457 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 CYB561D2O14569 222 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 ADAM12O43184 909 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 SUV39H1O43463 412 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 LAMTOR5O43504 91 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 TRAPPC3O43617 180 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 N4BP1O75113 896 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 CYP7B1O75881 506 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 OAZ2O95190 189 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms