RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SLC4A8Q2Y0W8 1093 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 BTBD16Q32M84 506 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 AASDHQ4L235 1098 aaPredicted RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 TMEM196Q5HYL7 178 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 CC2D1BQ5T0F9 858 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 FAM90A2PQ658T7 463 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 RINLQ6ZS11 566 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 RRAGAQ7L523 313 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 C2CD5Q86YS7 1000 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 LINC01465Q8N7H1 131 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 FAM118BQ9BPY3 351 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 BRD8Q9H0E9 1235 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 ELAC1Q9H777 363 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 WASH6PQ9NQA3 447 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 LOC105369274A0A096LPK9 316 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 LOC102723532A0A0G2JNH3 316 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 GXYLT2A0PJZ3 443 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 E7EVH7 732 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 J3KRW8 73 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 CLIC1O00299 241 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 DSCR3O14972 297 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 EPB41L2O43491 1005 aaKnown RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 AKT1P31749 480 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 SSBP2P81877 361 aaPredicted RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 DDX10Q13206 875 aaKnown RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 G3BP1Q13283 466 aaKnown RBP eCLIP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 SIM2Q14190 667 aaPredicted RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 MFSD13AQ14CX5 517 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 GRHL2Q6ISB3 625 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 RETSATQ6NUM9 610 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 VSTM1Q6UX27 236 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 OR4N4Q8N0Y3 316 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 C12orf76Q8N812 135 aaPredicted RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 PNPLA1Q8N8W4 532 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 CPT1BQ92523 772 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 RPL36ALQ969Q0 106 aaKnown RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 C3orf49Q96BT1 292 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 MCRS1Q96EZ8 462 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 EDC3Q96F86 508 aaKnown RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 C1QTNF7Q9BXJ2 289 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 ABHD16BQ9H3Z7 469 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 TMEM160Q9NX00 188 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 NDUFAF4Q9P032 175 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 IFT80Q9P2H3 777 aaPredicted RBP5.17□□□□□ -1.58
C11orf88-204ENST00000529661 BTBD3Q9Y2F9 522 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 ZBTB1Q9Y2K1 713 aa5.17□□□□□ -1.58
C11orf88-204ENST00000529661 CYP2D7A0A087X1C5 515 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 HMGB1P1B2RPK0 211 aaPredicted RBP5.16□□□□□ -1.58
C11orf88-204ENST00000529661 KIF28PB7ZC32 967 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 FYB1O15117 783 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 BCAR3O75815 825 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 TFRCP02786 760 aaKnown RBP5.16□□□□□ -1.58
C11orf88-204ENST00000529661 SFPQP23246 707 aaKnown RBP eCLIP5.16□□□□□ -1.58
C11orf88-204ENST00000529661 MMP13P45452 471 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 CCR5P51681 352 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 DGKQP52824 942 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 GPC5P78333 572 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 CFHR3Q02985 330 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 SEMA3BQ13214 749 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 RPS6KA2Q15349 733 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 GALNTL6Q49A17 601 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 ZNF569Q5MCW4 686 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 ZNF425Q6IV72 752 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 CCDC144NLQ6NUI1 221 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 RANBP10Q6VN20 620 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 ZNF813Q6ZN06 617 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 RASGRP2Q7LDG7 609 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 C1QL2Q7Z5L3 287 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 C16orf71Q8IYS4 520 aaPredicted RBP5.16□□□□□ -1.58
C11orf88-204ENST00000529661 TMEM57Q8N5G2 664 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 ESX1Q8N693 406 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 FAM71DQ8N9W8 422 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 OSR1Q8TAX0 266 aaPredicted RBP5.16□□□□□ -1.58
C11orf88-204ENST00000529661 DENND1AQ8TEH3 1009 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 SLC22A17Q8WUG5 538 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 COG8Q96MW5 612 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 MECRQ9BV79 373 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 VPS45Q9NRW7 570 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 RASSF1Q9NS23 344 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 KCND3Q9UK17 655 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 TMEM98Q9Y2Y6 226 aa5.16□□□□□ -1.58
C11orf88-204ENST00000529661 FAM90A20PA6NIJ5 464 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 M0QZQ0 153 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 TP73O15350 636 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 PRAMEF2O60811 474 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 CYP21A2P08686 494 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 SERPINA4P29622 427 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 GSTM5P46439 218 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 TUBP50607 506 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 VAMP2P63027 116 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 UBE3AQ05086 875 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 CHRNDQ07001 517 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 CCDC15Q0P6D6 951 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 DNASE1L3Q13609 305 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 DCTN1Q14203 1278 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 DAZAP2Q15038 168 aaPredicted RBP5.15□□□□□ -1.59
C11orf88-204ENST00000529661 TBRG1Q3YBR2 411 aa5.15□□□□□ -1.59
C11orf88-204ENST00000529661 TMEM63BQ5T3F8 832 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms