RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 SLC7A14Q8TBB6 771 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 CAVIN3Q969G5 261 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 PGLYRP2Q96PD5 576 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 BRD8Q9H0E9 1235 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 AMACRQ9UHK6 382 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 MYOFQ9NZM1 2061 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 TSPAN11A1L157 253 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 PAGE1O75459 146 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 RALAP11233 206 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 HOXB8P17481 243 aaPredicted RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 CDC25CP30307 473 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 CHRNA3P32297 505 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 CBARPQ8N350 705 aaPredicted RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 RNF139Q8WU17 664 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 TCEAL4Q96EI5 215 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 RUNDC3BQ96NL0 473 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 PNKPQ96T60 521 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 DNMT3LQ9UJW3 386 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 STAP1Q9ULZ2 295 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 COLQQ9Y215 455 aaPredicted RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 SLC27A6Q9Y2P4 619 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 LOC730098B7Z3J9 87 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 E9PAM4 449 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 LRIG2O94898 1065 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 RHOP08100 348 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 RHOQP17081 205 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 CD68P34810 354 aaPredicted RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 LRRC49Q8IUZ0 686 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 CMTM8Q8IZV2 173 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 NAT8LQ8N9F0 302 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 GLIS1Q8NBF1 620 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 ASIC4Q96FT7 647 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 TRIB3Q96RU7 358 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 TASP1Q9H6P5 420 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 KIF9Q9HAQ2 790 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 SMARCAL1Q9NZC9 954 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 ZNF510Q9Y2H8 683 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 FAM187AA6NFU0 413 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 CEBPBP17676 345 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 MSNP26038 577 aaKnown RBP8.1□□□□□ -1.11
SORL1-207ENST00000528339 CSNK1DP48730 415 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 STXBP5Q5T5C0 1151 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 NPAS3Q8IXF0 933 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 SIX6OS1Q8N1H7 587 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 UBL4BQ8N7F7 174 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 CEP112Q8N8E3 955 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 ELSPBP1Q96BH3 223 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 GDE1Q9NZC3 331 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 PPIL1Q9Y3C6 166 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 NFS1Q9Y697 457 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 M0QYT0 321 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 MFSD11O43934 449 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 TLR5O60602 858 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 ECI2O75521 394 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 SLC2A3P11169 496 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 GOT1P17174 413 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 PTPN2P17706 415 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 GDF10P55107 478 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 RBM10P98175 930 aaKnown RBP8.1□□□□□ -1.11
SORL1-207ENST00000528339 DLX2Q07687 328 aaPredicted RBP8.1□□□□□ -1.11
SORL1-207ENST00000528339 EML3Q32P44 896 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 PABPC1LQ4VXU2 614 aaKnown RBP8.1□□□□□ -1.11
SORL1-207ENST00000528339 HECTD3Q5T447 861 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 RNASEH2BQ5TBB1 312 aaKnown RBP8.1□□□□□ -1.11
SORL1-207ENST00000528339 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
SORL1-207ENST00000528339 OTUB2Q96DC9 234 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 MRGPRX3Q96LB0 322 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 NEUROG2Q9H2A3 272 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 IGSF9Q9P2J2 1179 aa8.1□□□□□ -1.11
SORL1-207ENST00000528339 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 ACSL4O60488 711 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 PRAMEF12O95522 483 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 CCR1P32246 355 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 EPHB3P54753 998 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 GRIN2CQ14957 1233 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 CDKN3Q16667 212 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 P3H1Q32P28 736 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 TCEAL5Q5H9L2 206 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 PPP2R2DQ66LE6 453 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 MED10Q9BTT4 135 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 LRRC4Q9HBW1 653 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 ARNT2Q9HBZ2 717 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 HOMER3Q9NSC5 361 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.09□□□□□ -1.11
SORL1-207ENST00000528339 SFMBT1Q9UHJ3 866 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 CCL26Q9Y258 94 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 UNC80Q8N2C7 3258 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 ADAMTS20P59510 1910 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 USP34Q70CQ2 3546 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 CCDC85CA6NKD9 419 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 PIK3R2O00459 728 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 MSI1O43347 362 aaKnown RBP8.09□□□□□ -1.11
SORL1-207ENST00000528339 FZD6O60353 706 aa8.09□□□□□ -1.11
SORL1-207ENST00000528339 PPFIA2O75334 1257 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms