RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 DDIT4Q9NX09 232 aa12.55□□□□□ -0.4
TRAPPC4-209ENST00000528230 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
TRAPPC4-209ENST00000528230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC4-209ENST00000528230 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
TRAPPC4-209ENST00000528230 STAP1Q9ULZ2 295 aa12.55□□□□□ -0.4
TRAPPC4-209ENST00000528230 PLA2G4CQ9UP65 541 aa12.55□□□□□ -0.4
TRAPPC4-209ENST00000528230 WASH3PC4AMC7 463 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 M0QYT0 321 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ZNF217O75362 1048 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 CAVIN2O95810 425 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ATP5BP06576 529 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 CCDC172P0C7W6 258 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ZNF806P0C7X5 589 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 CHRNB2P17787 502 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 IL12RB1P42701 662 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 RPS24P62847 133 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 FMO1Q01740 532 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ARID5AQ03989 594 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ZNF234Q14588 700 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 IQCB1Q15051 598 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ACBD5Q5T8D3 534 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 KIAA1211LQ6NV74 962 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 MFN1Q8IWA4 741 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 LGI2Q8N0V4 545 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 CPA5Q8WXQ8 436 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 RNF34Q969K3 372 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 LMLNQ96KR4 655 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 PRICKLE1Q96MT3 831 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 PRMT1Q99873 361 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ARRDC1-AS1Q9H2J1 176 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ABCB8Q9NUT2 735 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 XPO7Q9UIA9 1087 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 TMEM59LQ9UK28 342 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 MYO6Q9UM54 1294 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 USP18Q9UMW8 372 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 INVSQ9Y283 1065 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 PAXBP1Q9Y5B6 917 aa12.54□□□□□ -0.4
TRAPPC4-209ENST00000528230 ZNF292O60281 2723 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 F5H5T6 163 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 MAP3K13O43283 966 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 SYNCRIPO60506 623 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 DLDP09622 509 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 C7P10643 843 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 UNGP13051 313 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 POLR2EP19388 210 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 NDUFV2P19404 249 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 MMP8P22894 467 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 CD70P32970 193 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 ID4P47928 161 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 CXCR3P49682 368 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 RNASE9P60153 205 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC12A1Q13621 1099 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC25A52Q3SY17 297 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 BRMS1LQ5PSV4 323 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 FAM102AQ5T9C2 384 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 TTC39BQ5VTQ0 682 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 RAP1GAP2Q684P5 730 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 MBLAC2Q68D91 279 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 PRR23CQ6ZRP0 262 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.43e-8■■□□□ 12.3
TRAPPC4-209ENST00000528230 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 CHSY1Q86X52 802 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 WFDC5Q8TCV5 224 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 RLN3Q8WXF3 142 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 TTC17Q96AE7 1141 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 MYEOVQ96EZ4 313 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 MRGPRX1Q96LB2 322 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 TMEM245Q9H330 911 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 WDCPQ9H6R7 721 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 CALCOCO1Q9P1Z2 691 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 STIM2Q9P246 746 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 RAD54BQ9Y620 910 aa12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 TNRC6BQ9UPQ9 1833 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-209ENST00000528230 MUC22E2RYF6 1773 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 A0A1W2PQC6 194 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 SYCE3A1L190 88 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 BCLAF3A2AJT9 711 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 TEX33O43247 280 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 MOCS3O95396 460 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 ASLP04424 464 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 FERP16591 822 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 BCKDHBP21953 392 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 MPLP40238 635 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 DPP6P42658 865 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 OXCT1P55809 520 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 LMAN2Q12907 356 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 NME3Q13232 169 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 CAMK2GQ13555 558 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 CDH18Q13634 790 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 PTPRNQ16849 979 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms