RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 FOXN1O15353 648 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 OR7A10O76100 309 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 GDF11O95390 407 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 FGRP09769 529 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 MAGEA4P43358 317 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 CBX3Q13185 183 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF613Q6PF04 617 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 POTEHQ6S545 545 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 POTEGQ6S5H5 508 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF655Q8N720 491 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-216ENST00000527467 TOPORSQ9NS56 1045 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-216ENST00000527467 CDH9Q9ULB4 789 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 SNX12Q9UMY4 172 aa7.4□□□□□ -1.22
CTNND1-216ENST00000527467 RPAP1Q9BWH6 1393 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-216ENST00000527467 IQCMA0A1B0GVH7 501 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 NFKBIEO00221 500 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ZBTB7BO15156 539 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 KATNA1O75449 491 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 NOL4O94818 638 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 MOCS2O96007 188 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ASS1P00966 412 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 THRBP10828 461 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 GHRP10912 638 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 GUCY1A2P33402 732 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 EIF5AP63241 154 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 CDH18Q13634 790 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 DDX39BQ13838 428 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 FAM83BQ5T0W9 1011 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ENOSF1Q7L5Y1 443 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 RASGRP2Q7LDG7 609 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 FSTL5Q8N475 847 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 MYCBPAPQ8TBZ2 947 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 DCAF4Q8WV16 495 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ZHX1-C8orf76Q96EF9 292 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 TEKT5Q96M29 485 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 C12orf66Q96MD2 445 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 KLF6Q99612 283 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 MND1Q9BWT6 205 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 UGT2B28Q9BY64 529 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 WDR41Q9HAD4 459 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 XPNPEP3Q9NQH7 507 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ARHGAP28Q9P2N2 729 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 SRRDQ9UH36 339 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 PALD1Q9ULE6 856 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 POLIQ9UNA4 740 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 SLC45A1Q9Y2W3 748 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 SRPRBQ9Y5M8 271 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 RAD54BQ9Y620 910 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 CICQ96RK0 1608 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 TOPAZ1Q8N9V7 1692 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 GLRA3O75311 464 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 CCL5P13501 91 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ATP5JP18859 108 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 RAP1GAPP47736 663 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 TUFMP49411 452 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 NR1H2P55055 460 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 NME3Q13232 169 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 TAF13Q15543 124 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 TTLL9Q3SXZ7 439 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 PPM1LQ5SGD2 360 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 FAM102AQ5T9C2 384 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 BROXQ5VW32 411 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 UGT3A1Q6NUS8 523 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 LRRC74BQ6ZQY2 392 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 C3orf62Q6ZUJ4 267 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 CXXC5Q7LFL8 322 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 RASAL3Q86YV0 1011 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 IFNL3Q8IZI9 196 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 C8orf59Q8N0T1 100 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 PNPT1Q8TCS8 783 aaKnown RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 SPPL2AQ8TCT8 520 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF296Q8WUU4 475 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 FAM167AQ96KS9 214 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 MAGEB18Q96M61 343 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 FRMD8Q9BZ67 464 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-216ENST00000527467 SYNDIG1Q9H7V2 258 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 AASDHPPTQ9NRN7 309 aa7.4□□□□□ -1.23
CTNND1-216ENST00000527467 COL1A1P02452 1464 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-216ENST00000527467 GH2P01242 217 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 DBTP11182 482 aaKnown RBP7.39□□□□□ -1.23
CTNND1-216ENST00000527467 GNA15P30679 374 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 TPI1P60174 286 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 DLG4P78352 724 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 CDK17Q00537 523 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 MTMR2Q13614 643 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 ACAP1Q15027 740 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 KCNA10Q16322 511 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 LACTB2Q53H82 288 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-216ENST00000527467 INO80DQ53TQ3 878 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-216ENST00000527467 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 SHQ1Q6PI26 577 aaKnown RBP7.39□□□□□ -1.23
CTNND1-216ENST00000527467 DHFR2Q86XF0 187 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 RAB43Q86YS6 212 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 HIPK1Q86Z02 1210 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 ADSSL1Q8N142 457 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
CTNND1-216ENST00000527467 KYQ8NBH2 561 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 AFG1LQ8WV93 481 aa7.39□□□□□ -1.23
CTNND1-216ENST00000527467 POP1Q99575 1024 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms