RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CLEC17AQ6ZS10 378 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 CHST9Q7L1S5 443 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 SLC41A1Q8IVJ1 513 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-207ENST00000527189 HJURPQ8NCD3 748 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-207ENST00000527189 OR2T3Q8NH03 318 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 NOX5Q96PH1 765 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 SLC6A17Q9H1V8 727 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 CAPN10Q9HC96 672 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 ASNSD1Q9NWL6 643 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 SUN2Q9UH99 717 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 AKAP13Q12802 2813 aa13.91□□□□□ -0.18
CAPN1-207ENST00000527189 DMXL2Q8TDJ6 3036 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 ASH1LQ9NR48 2969 aaKnown RBP13.9□□□□□ -0.18
CAPN1-207ENST00000527189 TNRC6BQ9UPQ9 1833 aaKnown RBP13.9□□□□□ -0.18
CAPN1-207ENST00000527189 GOLGA6L7A0A1B0GV03 622 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 UPK3BL1B0FP48 263 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 UPK3BL2E5RIL1 263 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 E5RJQ4 531 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 IGLV3-25P01717 112 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 APOEP02649 317 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SYPP08247 313 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SLC2A3P11169 496 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 GNSP15586 552 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 POLR2EP19388 210 aaKnown RBP13.9□□□□□ -0.18
CAPN1-207ENST00000527189 PRKCHP24723 683 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SLC6A4P31645 630 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 USP8P40818 1118 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 TPMTP51580 245 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 BPIFB4P59827 614 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SHC2P98077 582 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 ZBTB16Q05516 673 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 PDCLQ13371 301 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 EIF4EBP2Q13542 120 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-207ENST00000527189 MS4A13Q5J8X5 152 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 EFHC1Q5JVL4 640 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SYPL2Q5VXT5 272 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 MBLAC2Q68D91 279 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 NADSYN1Q6IA69 706 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 RFWD3Q6PCD5 774 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 MFN1Q8IWA4 741 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 DEFB119Q8N690 84 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 KDM1BQ8NB78 822 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SORCS1Q8WY21 1168 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 DNASE2BQ8WZ79 361 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 TOE1Q96GM8 510 aaKnown RBP13.9□□□□□ -0.18
CAPN1-207ENST00000527189 LMLNQ96KR4 655 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 HSPA12BQ96MM6 686 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 PCED1AQ9H1Q7 454 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 NDST4Q9H3R1 872 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN1-207ENST00000527189 SLC12A6Q9UHW9 1150 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 CYTH4Q9UIA0 394 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 PI4KAP42356 2102 aa13.9□□□□□ -0.18
CAPN1-207ENST00000527189 LAMA5O15230 3695 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 ARHGAP33O14559 1287 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 TRUB2O95900 331 aaKnown RBP13.89□□□□□ -0.19
CAPN1-207ENST00000527189 ASLP04424 464 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 CFIP05156 583 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 PMLP29590 882 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 SGSHP51688 502 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 ATXN3P54252 364 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-207ENST00000527189 PTPRNQ16849 979 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 VWA3BQ502W6 1294 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 FNDC3BQ53EP0 1204 aaKnown RBP13.89□□□□□ -0.19
CAPN1-207ENST00000527189 PSAPL1Q6NUJ1 521 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 RGL4Q8IZJ4 473 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 ERLEC1Q96DZ1 483 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 PPP1R13BQ96KQ4 1090 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 TUBGCP2Q9BSJ2 902 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 TMEM51Q9NW97 253 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 DNAJC12Q9UKB3 198 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 ANGPTL2Q9UKU9 493 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 CEP192Q8TEP8 1941 aa13.89□□□□□ -0.19
CAPN1-207ENST00000527189 CKAP5Q14008 2032 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 METTL12A8MUP2 240 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 KCNJ18B7U540 433 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-207ENST00000527189 HSF2BPO75031 334 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 KCNA4P22459 653 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 CD70P32970 193 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 KRT9P35527 623 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 NOVA1P51513 510 aaKnown RBP13.88□□□□□ -0.19
CAPN1-207ENST00000527189 ST8SIA6P61647 398 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 CDK17Q00537 523 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 SLC14A1Q13336 389 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 ARID5BQ14865 1188 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 SH3PXD2AQ5TCZ1 1133 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
CAPN1-207ENST00000527189 HDDC3Q8N4P3 179 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms