RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 GGA2Q9UJY4 613 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 PCDHB1Q9Y5F3 818 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 BOD1L1Q8NFC6 3051 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 PYCARD-AS1I3L0S3 204 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 TLR4O00206 839 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 CLIC2O15247 247 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 STX6O43752 255 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 LATS1O95835 1130 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 RPN1P04843 607 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 PABPC1P11940 636 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 P4HA1P13674 534 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 ADORA2BP29275 332 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 CYP2J2P51589 502 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 EFEMP1Q12805 493 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 E2F4Q16254 413 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 SGSM1Q2NKQ1 1148 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 RAB41Q5JT25 222 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 IQCHQ86VS3 1027 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 KDM1BQ8NB78 822 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 DUSP16Q9BY84 665 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 IRX2Q9BZI1 471 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 ABCB8Q9NUT2 735 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 FBXL12Q9NXK8 326 aa16.95■□□□□ 0.3
CHMP4A-203ENST00000527154 LRRC72A6NJI9 287 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 K7ENP7 123 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 PHACTR2O75167 634 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 LSSP48449 732 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 ZNF211Q13398 564 aaPredicted RBP16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 CST6Q15828 149 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 HNRNPA1L2Q32P51 320 aaKnown RBP16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 FAM26FQ5R3K3 315 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 MPP7Q5T2T1 576 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 MBLAC2Q68D91 279 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 INO80CQ6PI98 192 aaPredicted RBP16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 BHLHA9Q7RTU4 235 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 MFSD2AQ8NA29 543 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 TTC17Q96AE7 1141 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 UBXN6Q9BZV1 441 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 NEUROG2Q9H2A3 272 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 NCKAP1Q9Y2A7 1128 aa16.94■□□□□ 0.3
CHMP4A-203ENST00000527154 TRIM38O00635 465 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 SLC28A2O43868 658 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 ATP5BP06576 529 aaKnown RBP16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 HMBSP08397 361 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 BIRC3Q13489 604 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 WFDC5Q8TCV5 224 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 JAKMIP2Q96AA8 810 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 AASDHPPTQ9NRN7 309 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 DMAC2Q9NW81 257 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 ARHGAP20Q9P2F6 1191 aa16.93■□□□□ 0.3
CHMP4A-203ENST00000527154 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 TERTO14746 1132 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 MID1O15344 667 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 GIMD1P0DJR0 217 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 ADPRHP54922 357 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 ASIC1P78348 528 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 SFSWAPQ12872 951 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 OVGP1Q12889 678 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 ADGRF1Q5T601 910 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 C9orf64Q5T6V5 341 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 PM20D1Q6GTS8 502 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 KDM7AQ6ZMT4 941 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 ARHGAP18Q8N392 663 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 SLC25A45Q8N413 288 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 KCNE4Q8WWG9 221 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 MRGPRX3Q96LB0 322 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 ARID3AQ99856 593 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 NT5C1AQ9BXI3 368 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 MTG2Q9H4K7 406 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 POLR1BQ9H9Y6 1135 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 TJP2Q9UDY2 1190 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 STRIP2Q9ULQ0 834 aa16.92■□□□□ 0.3
CHMP4A-203ENST00000527154 A0A1W2PP55 124 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 SIGLEC6O43699 453 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 SIN3BO75182 1162 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 MPOP05164 745 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 SLFN14P0C7P3 912 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 CD70P32970 193 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 SGSHP51688 502 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 PPP1R26Q5T8A7 1209 aaPredicted RBP16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 NAPEPLDQ6IQ20 393 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 AADATQ8N5Z0 425 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 TMA16Q96EY4 203 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 NAF1Q96HR8 494 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 SERAC1Q96JX3 654 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 PANK2Q9BZ23 570 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 LRRC27Q9C0I9 530 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 IL17BQ9UHF5 180 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 HBS1LQ9Y450 684 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 ITIH6Q6UXX5 1313 aa16.91■□□□□ 0.3
CHMP4A-203ENST00000527154 COL27A1Q8IZC6 1860 aaPredicted RBP16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 TARSL2A2RTX5 802 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 FAM47DPA6NHR8 397 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 OPA1O60313 960 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 CD2BP2O95400 341 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 CKMT1AP12532 417 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms