RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SEPT10Q9P0V9 454 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 C15orf41Q9Y2V0 281 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 YJEFN3A6XGL0 299 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 E7ENQ6 273 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 EEF2KO00418 725 aaKnown RBP18.08■□□□□ 0.48
USH1C-205ENST00000527020 PEX11AO75192 247 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 ALDOAP04075 364 aaKnown RBP18.08■□□□□ 0.48
USH1C-205ENST00000527020 BPGMP07738 259 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 FAM200BP0CF97 657 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 RARBP10826 455 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 CNTFP26441 200 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 ADRA1BP35368 520 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 DAOAP59103 153 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 TMPRSS15P98073 1019 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 PURAQ00577 322 aaKnown RBP18.08■□□□□ 0.48
USH1C-205ENST00000527020 CASC4Q6P4E1 433 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 CTU1Q7Z7A3 348 aaKnown RBP18.08■□□□□ 0.48
USH1C-205ENST00000527020 SYBUQ9NX95 663 aa18.08■□□□□ 0.48
USH1C-205ENST00000527020 NKX1-2Q9UD57 310 aaPredicted RBP18.08■□□□□ 0.48
USH1C-205ENST00000527020 HNRNPCL1O60812 293 aaKnown RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 SNNO75324 88 aaPredicted RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 STK10O94804 968 aaKnown RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 PGAM1P18669 254 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 CRYMQ14894 314 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 PACS1Q6VY07 963 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 NUDCD3Q8IVD9 361 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 TRIM42Q8IWZ5 723 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.07■□□□□ 0.48
USH1C-205ENST00000527020 CCNYQ8ND76 341 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 C3orf58Q8NDZ4 430 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 SLC7A14Q8TBB6 771 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 KCNK16Q96T55 309 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 IGSF9Q9P2J2 1179 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 PSAT1Q9Y617 370 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 MYBPHLA2RUH7 354 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 I3L4J1 428 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 CELF2O95319 508 aaKnown RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 IGHA2P01877 340 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 MAP2K2P36507 400 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 MLH1P40692 756 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 OLIG2Q13516 323 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 FSCN1Q16658 493 aaKnown RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 FAM35AQ86V20 835 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 NSL1Q96IY1 281 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 SLC9A7Q96T83 725 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 SYT15Q9BQS2 421 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 KATNAL1Q9BW62 490 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 CADM1Q9BY67 442 aaKnown RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 MIOSQ9NXC5 875 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 EMCNQ9ULC0 261 aa18.07■□□□□ 0.48
USH1C-205ENST00000527020 TIMM13Q9Y5L4 95 aaPredicted RBP18.07■□□□□ 0.48
USH1C-205ENST00000527020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.06■□□□□ 0.48
USH1C-205ENST00000527020 C9IYK1 514 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 FCHO1O14526 889 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 PPP1R12AO14974 1030 aaPredicted RBP18.06■□□□□ 0.48
USH1C-205ENST00000527020 BIRC5O15392 142 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 ERCC2P18074 760 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 CYP2B6P20813 491 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 GJA9P57773 515 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 SCAPQ12770 1279 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 KRT72Q14CN4 511 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 FAM91A1Q658Y4 838 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 ATG16L1Q676U5 607 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 BHLHA9Q7RTU4 235 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 ALYREFQ86V81 257 aaKnown RBP18.06■□□□□ 0.48
USH1C-205ENST00000527020 C2orf69Q8N8R5 385 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 PCED1BQ96HM7 432 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 PGLYRP2Q96PD5 576 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 NMUR2Q9GZQ4 415 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 XPNPEP3Q9NQH7 507 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 KCNK4Q9NYG8 393 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 Q9Y3F1 56 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
USH1C-205ENST00000527020 SCN10AQ9Y5Y9 1956 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 MYADML2A6NDP7 307 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 KCNK1O00180 336 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 AP1G2O75843 785 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 CLCNKBP51801 687 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 ZBTB16Q05516 673 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 RAB41Q5JT25 222 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 BSPRYQ5W0U4 402 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 RAB3IL1Q8TBN0 382 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 PGBD4Q96DM1 585 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 GAD1Q99259 594 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 TACO1Q9BSH4 297 aaKnown RBP18.06■□□□□ 0.48
USH1C-205ENST00000527020 DENND2DQ9H6A0 471 aaPredicted RBP18.06■□□□□ 0.48
USH1C-205ENST00000527020 IL1RAPL1Q9NZN1 696 aa18.06■□□□□ 0.48
USH1C-205ENST00000527020 HHLA1C9JL84 531 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 FBXO21O94952 628 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 PTPN3P26045 913 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 PDE1CQ14123 709 aaPredicted RBP18.05■□□□□ 0.48
USH1C-205ENST00000527020 C16orf46Q6P387 395 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 CCNJLQ8IV13 435 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 ARID3BQ8IVW6 561 aaPredicted RBP18.05■□□□□ 0.48
USH1C-205ENST00000527020 NPWQ8N729 165 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 LPPQ93052 612 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 BTBD10Q9BSF8 475 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms