RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 NRG1Q02297 640 aaPredicted RBP20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 GPS1Q13098 491 aa20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 P3H1Q32P28 736 aa20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 HECTD3Q5T447 861 aa20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 KREMEN2Q8NCW0 462 aa20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 QKIQ96PU8 341 aaKnown RBP eCLIP20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 CDK5RAP1Q96SZ6 601 aaKnown RBP20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 FMO2Q99518 471 aa20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 DNMT3LQ9UJW3 386 aa20.49■□□□□ 0.87
PPP1CA-204ENST00000526510 NOTCH4Q99466 2003 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 C2orf78A6NCI8 922 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 RB1P06400 928 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 C8AP07357 584 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 STIP1P31948 543 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 ATP5C1P36542 298 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 CLCN4P51793 760 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 RING1Q06587 406 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 SLC45A4Q5BKX6 768 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 MS4A13Q5J8X5 152 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 IZUMO3Q5VZ72 239 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 ZNF683Q8IZ20 524 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 CCHCR1Q8TD31 782 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 RTP4Q96DX8 246 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 C1orf74Q96LT6 269 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 LRRC3Q9BY71 257 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 KLC2Q9H0B6 622 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 RNF38Q9H0F5 515 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 HELZP42694 1942 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 DNALI1O14645 258 aaPredicted RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 KCNN4O15554 427 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 GLUD1P00367 558 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 OAS1P00973 400 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 APOEP02649 317 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 VAV1P15498 845 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 PBX2P40425 430 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 KCNQ1P51787 676 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 CALCOCO2Q13137 446 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 KLHDC10Q6PID8 442 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 ITIH5Q86UX2 942 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 CDKL3Q8IVW4 592 aaPredicted RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 MREGQ8N565 214 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 BTN2A3PQ96KV6 586 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 LGMNQ99538 433 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 TXLNGYQ9BZA5 131 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 UXTQ9UBK9 157 aaPredicted RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 HBS1LQ9Y450 684 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 NR2E3Q9Y5X4 410 aa20.48■□□□□ 0.87
PPP1CA-204ENST00000526510 E9PAM4 449 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 HSPA9P38646 679 aaKnown RBP20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 TUBP50607 506 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 HIBCHQ6NVY1 386 aaPredicted RBP20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 RWDD4Q6NW29 188 aaKnown RBP20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 CCDC149Q6ZUS6 474 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 TMC3Q7Z5M5 1100 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 TMC8Q8IU68 726 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 HS6ST3Q8IZP7 471 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 ATP6V0D2Q8N8Y2 350 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 TBC1D31Q96DN5 1066 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 TGS1Q96RS0 853 aaKnown RBP20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 FAM129AQ9BZQ8 928 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 ANAPC5Q9UJX4 755 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 HPCAL4Q9UM19 191 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 ASB3Q9Y575 518 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 PCDHA11Q9Y5I1 949 aa20.47■□□□□ 0.87
PPP1CA-204ENST00000526510 CFAP69A5D8W1 941 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 HACD1B0YJ81 288 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 HTR7P34969 479 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 PPP3CCP48454 512 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 KPNA1P52294 538 aaPredicted RBP20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 ERVK-21P61565 698 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 PRKD1Q15139 912 aaPredicted RBP20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 NADSYN1Q6IA69 706 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 TADA2BQ86TJ2 420 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 MICAL1Q8TDZ2 1067 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 SLC22A17Q8WUG5 538 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 TFB1MQ8WVM0 346 aaKnown RBP20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 PRMT1Q99873 361 aaKnown RBP20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 PRDM12Q9H4Q4 367 aa20.46■□□□□ 0.87
PPP1CA-204ENST00000526510 NRG2O14511 850 aaPredicted RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 LRG1P02750 347 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 CHKAP35790 457 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 IRAK1P51617 712 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 AUHQ13825 339 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 RNASEH2BQ5TBB1 312 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 BZW1Q7L1Q6 419 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 BBOF1Q8ND07 529 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 PWWP2AQ96N64 755 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 MPP6Q9NZW5 540 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 VANGL2Q9ULK5 521 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 TPX2Q9ULW0 747 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 CHD5Q8TDI0 1954 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 PPFIA2O75334 1257 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 DHX9Q08211 1270 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 UAP1Q16222 522 aaPredicted RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 RAP1GAP2Q684P5 730 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 GAREM2Q75VX8 874 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 TAB3Q8N5C8 712 aaPredicted RBP20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 WBP2Q969T9 261 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 ZBTB9Q96C00 473 aa20.45■□□□□ 0.86
PPP1CA-204ENST00000526510 LRRC45Q96CN5 670 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms