RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 NDUFA10O95299 355 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 DESP17661 470 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 DRD1P21728 446 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 HOXD9P28356 352 aaPredicted RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 AUHQ13825 339 aaKnown RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 CCINQ13939 588 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 ACAP1Q15027 740 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 RNF43Q68DV7 783 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 FSTL4Q6MZW2 842 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 FBXL22Q6P050 247 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 LGI2Q8N0V4 545 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 ARFGAP1Q8N6T3 406 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 HJURPQ8NCD3 748 aaPredicted RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 EIF3CQ99613 913 aaKnown RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 SLC2A11Q9BYW1 496 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 LMAN1LQ9HAT1 526 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 TMPRSS4Q9NRS4 437 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 DNAJC17Q9NVM6 304 aaKnown RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 DEC1Q9P2X7 70 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 MIA3Q5JRA6 1907 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 MYO1FO00160 1098 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 TRIM24O15164 1050 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 TBL1XO60907 577 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 RNF8O76064 485 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 KAT7O95251 611 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 EGFP01133 1207 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
SMPD1-202ENST00000526280 MAGEA1P43355 309 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
SMPD1-202ENST00000526280 PIGHQ14442 188 aaPredicted RBP13.37□□□□□ -0.27
SMPD1-202ENST00000526280 SPA17Q15506 151 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 C5orf22Q49AR2 442 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 PREPLQ4J6C6 727 aaPredicted RBP13.37□□□□□ -0.27
SMPD1-202ENST00000526280 DGKKQ5KSL6 1271 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 ARTNQ5T4W7 220 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 SCYL2Q6P3W7 929 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 RAD9BQ6WBX8 426 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 C14orf80Q86SX3 495 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 ZNF683Q8IZ20 524 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 CFAP52Q8N1V2 620 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 CCDC185Q8N715 623 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 NIPA2Q8N8Q9 360 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 ZNF564Q8TBZ8 553 aaPredicted RBP13.37□□□□□ -0.27
SMPD1-202ENST00000526280 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
SMPD1-202ENST00000526280 NTAN1Q96AB6 310 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 NCAPGQ9BPX3 1015 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 OSBPL2Q9H1P3 480 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 ARHGEF4Q9NR80 690 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 CTTNBP2NLQ9P2B4 639 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 IP6K2Q9UHH9 426 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 ANAPC7Q9UJX3 599 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 CLEC4EQ9ULY5 219 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
SMPD1-202ENST00000526280 TYW5A2RUC4 315 aaKnown RBP13.36□□□□□ -0.27
SMPD1-202ENST00000526280 K7EQS6 105 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 APODP05090 189 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 AVPR2P30518 371 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 GRIA2P42262 883 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 RPS9P46781 194 aaKnown RBP13.36□□□□□ -0.27
SMPD1-202ENST00000526280 DGKGP49619 791 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 AIF1P55008 147 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SCAPQ12770 1279 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 LRRC32Q14392 662 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 TCEAL1Q15170 157 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 RABGAP1LQ5R372 815 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 TTC39BQ5VTQ0 682 aaPredicted RBP13.36□□□□□ -0.27
SMPD1-202ENST00000526280 GRAMD4Q6IC98 578 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SLFN11Q7Z7L1 901 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SFTPA1Q8IWL2 248 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 RHOT2Q8IXI1 618 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SYNPOQ8N3V7 929 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 TMEM105Q8N8V8 129 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 TERB1Q8NA31 727 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SLC35G2Q8TBE7 412 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 IGSF8Q969P0 613 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 OSGEPQ9NPF4 335 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 RBM12Q9NTZ6 932 aaKnown RBP13.36□□□□□ -0.27
SMPD1-202ENST00000526280 STIM2Q9P246 746 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 OR12D3Q9UGF7 316 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 VANGL2Q9ULK5 521 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SLC27A6Q9Y2P4 619 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
SMPD1-202ENST00000526280 KIAA1549LQ6ZVL6 1849 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 IGLV3-10A0A075B6K4 115 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 TBC1D3BA6NDS4 549 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 DRGXA6NNA5 263 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 LRCH4O75427 683 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 MTA2O94776 668 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms