RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 UBASH3AP57075 661 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 TBX4P57082 545 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 JAM2P57087 298 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 RING1Q06587 406 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 BYSLQ13895 437 aaKnown RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 PTPRNQ16849 979 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 PEAR1Q5VY43 1037 aaPredicted RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 BEND5Q7L4P6 421 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 METTL3Q86U44 580 aaKnown RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 ZNF419Q96HQ0 510 aaPredicted RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 FSCN3Q9NQT6 498 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 XPO7Q9UIA9 1087 aaKnown RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 PCDHGC3Q9UN70 934 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 TPRP12270 2363 aaKnown RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 ADAMTS9Q9P2N4 1935 aa13.02□□□□□ -0.32
SMCO4-202ENST00000525141 E5RJQ4 531 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 EPHB6O15197 1021 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 IGLV3-25P01717 112 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 C7P10643 843 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 CD70P32970 193 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 ZNF33AQ06730 810 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 SLC47A2Q86VL8 602 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 SYT12Q8IV01 421 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMCO4-202ENST00000525141 CYB5D2Q8WUJ1 264 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 EDEM3Q9BZQ6 932 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 LHX5Q9H2C1 402 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 TMEM245Q9H330 911 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 NLRC4Q9NPP4 1024 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 ST7Q9NRC1 585 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
SMCO4-202ENST00000525141 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
SMCO4-202ENST00000525141 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.33
SMCO4-202ENST00000525141 MYO6Q9UM54 1294 aa13.02□□□□□ -0.33
SMCO4-202ENST00000525141 CKAP5Q14008 2032 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 NUMA1Q14980 2115 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 GIPC1O14908 333 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 NPC1O15118 1278 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 TBL1XO60907 577 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 ZNF217O75362 1048 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 KCNK5O95279 499 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
SMCO4-202ENST00000525141 HLA-EP13747 358 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 CYP11B1P15538 503 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 KRT9P35527 623 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 SOX5P35711 763 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 STAT1P42224 750 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 ACADSBP45954 432 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
SMCO4-202ENST00000525141 RPL6Q02878 288 aaKnown RBP13.01□□□□□ -0.33
SMCO4-202ENST00000525141 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 MPP7Q5T2T1 576 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 LYSMD4Q5XG99 296 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 IL31Q6EBC2 164 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 SLC23A3Q6PIS1 610 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 SLC36A4Q6YBV0 504 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 CHST9Q7L1S5 443 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 TAC4Q86UU9 113 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 TMPRSS6Q8IU80 811 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 MYO19Q96H55 970 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 SPACA7Q96KW9 195 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
SMCO4-202ENST00000525141 SPAG5Q96R06 1193 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 CPXM1Q96SM3 734 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 CIPCQ9C0C6 399 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 NUCKS1Q9H1E3 243 aaKnown RBP13.01□□□□□ -0.33
SMCO4-202ENST00000525141 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 ABCB8Q9NUT2 735 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 USP36Q9P275 1121 aaKnown RBP13.01□□□□□ -0.33
SMCO4-202ENST00000525141 TLR6Q9Y2C9 796 aa13.01□□□□□ -0.33
SMCO4-202ENST00000525141 KNL1Q8NG31 2342 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 ATXN2Q99700 1313 aaKnown RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 KCNU1A8MYU2 1149 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 AP5Z1O43299 807 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 TPM3P06753 285 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 MAOBP27338 520 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 PBX1P40424 430 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 YWHAZP63104 245 aaKnown RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 CAMK2GQ13555 558 aaPredicted RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 EIF4HQ15056 248 aaKnown RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 DCAF6Q58WW2 860 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 TRIM61Q5EBN2 209 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 FIGNQ5HY92 759 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 MS4A13Q5J8X5 152 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 NUGGCQ68CJ6 796 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 MBLAC2Q68D91 279 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 KIAA1324Q6UXG2 1013 aaKnown RBP13□□□□□ -0.33
SMCO4-202ENST00000525141 MMS22LQ6ZRQ5 1243 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 ZNF677Q86XU0 584 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 CFAP52Q8N1V2 620 aa13□□□□□ -0.33
SMCO4-202ENST00000525141 ZNF366Q8N895 744 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms