RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NTSR1P30989 418 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC6A4P31645 630 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 HNRNPH3P31942 346 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 RFC1P35251 1148 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 TIE1P35590 1138 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 EIF4A3P38919 411 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 NNMTP40261 264 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF75DP51815 510 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 DGKEP52429 567 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF143P52747 638 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 AIF1P55008 147 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ST8SIA6P61647 398 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 RPS24P62847 133 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PITX1P78337 314 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SATB1Q01826 763 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PTP4A2Q12974 167 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF177Q13360 481 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAMLD1Q13495 774 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC12A1Q13621 1099 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 AUHQ13825 339 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 DMC1Q14565 340 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 GAB4Q2WGN9 574 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 FNDC3BQ53EP0 1204 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC122Q5T0U0 273 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 E4F1Q66K89 784 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 NADSYN1Q6IA69 706 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SCYL2Q6P3W7 929 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ALKBH5Q6P6C2 394 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SERPINA13PQ6UXR4 307 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 CHST9Q7L1S5 443 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 CFAP52Q8N1V2 620 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PGBD3Q8N328 593 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC33Q8N5R6 958 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 CAMKK1Q8N5S9 505 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ALLCQ8N6M5 410 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRSS33Q8NF86 280 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 JOSD2Q8TAC2 188 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 FIBINQ8TAL6 211 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM172AQ8WUF8 416 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 NT5C3BQ969T7 300 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM122AQ96E09 287 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 MRFAP1L1Q96HT8 127 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SPACA7Q96KW9 195 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRICKLE1Q96MT3 831 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 HAPLN3Q96S86 360 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SYT11Q9BT88 431 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SEMA4AQ9H3S1 761 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 FBRSL1Q9HCM7 1045 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ABCB8Q9NUT2 735 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZSCAN32Q9NX65 697 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARHGEF38Q9NXL2 777 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 DONSONQ9NYP3 566 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 TAS2R14Q9NYV8 317 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIAA1522Q9P206 1035 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 LCMT1Q9UIC8 334 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 VANGL2Q9ULK5 521 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 MMP17Q9ULZ9 603 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 NCOR1O75376 2440 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF638Q14966 1978 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 DENND4CQ5VZ89 1909 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ANAPC1Q9H1A4 1944 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 VCANP13611 3396 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 COL4A3Q01955 1670 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 A0A087X0T9 212 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 A0A0A0MRY4 1105 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC163A0A0D9SF12 145 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TCRBV21S2A2A0A5A6 115 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 EIF3CLB5ME19 914 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 E9PAM4 449 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 GFRA2O00451 464 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCP110O43303 1012 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 NRDCO43847 1150 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRPSAP2O60256 369 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SRGAP2O75044 1071 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 GJB6O95452 261 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADCY5O95622 1261 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 RHOCP08134 193 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 PLEKP08567 350 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 DLDP09622 509 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 H2AFZP0C0S5 128 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CISD3P0C7P0 127 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM228BP0C875 321 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TFE3P19532 575 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 HLA-FP30511 346 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 HOXA6P31267 233 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CNR2P34972 360 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CYLC1P35663 651 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ETFBP38117 255 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SSR1P43307 286 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SGSHP51688 502 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADKP55263 362 aaKnown RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 CDH4P55283 916 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 KRT83P78385 493 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 SULT2A1Q06520 285 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 TCF15Q12870 199 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAPK8IP2Q13387 824 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 FZD5Q13467 585 aa5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 EIF4EBP2Q13542 120 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P40-201ENST00000525121 BYSLQ13895 437 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms