RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 EMCNQ9ULC0 261 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 ZNF236Q9UL36 1845 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 MX2P20592 715 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 AMPD1P23109 780 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 PNPLA4P41247 253 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 MXRA7P84157 204 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 KDSRQ06136 332 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 USP4Q13107 963 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 TUBB3Q13509 450 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 PDE1CQ14123 709 aaPredicted RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 HIC1Q14526 733 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 RBBP5Q15291 538 aaKnown RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 SPANXN3Q5MJ09 141 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 RABGAP1LQ5R372 815 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 N4BP2L1Q5TBK1 243 aaPredicted RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 GRTP1Q5TC63 336 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 SLC27A1Q6PCB7 646 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 OR6B3Q8NGW1 331 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 JADE3Q92613 823 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 PANX3Q96QZ0 392 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 CPNE1Q99829 537 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 B3GNT5Q9BYG0 378 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 NDE1Q9NXR1 346 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 IGSF9Q9P2J2 1179 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 SLC7A8Q9UHI5 535 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 ASB3Q9Y575 518 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 UNCXA6NJT0 531 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PRR5-ARHGAP8B1AHC4 643 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 TPP1O14773 563 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CD4P01730 458 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PYGLP06737 847 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 POLBP06746 335 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 ITGA2BP08514 1039 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 VAV1P15498 845 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 TFE3P19532 575 aaPredicted RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 SP100P23497 879 aaPredicted RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 PRDX6P30041 224 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CPOXP36551 454 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CPA2P48052 419 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 ARHGAP8P85298 464 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PCLAFQ15004 111 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 SOWAHAQ2M3V2 549 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 C1orf146Q5VVC0 180 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CASC4Q6P4E1 433 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CCDC185Q8N715 623 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 ZNF560Q96MR9 790 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 TRAPPC9Q96Q05 1148 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 C16orf70Q9BSU1 422 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 THTPAQ9BU02 230 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 GDAP2Q9NXN4 497 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PDP2Q9P2J9 529 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 TXNDC16Q9P2K2 825 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 MARCOQ9UEW3 520 aaPredicted RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 DNAJC16Q9Y2G8 782 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 GLTPD2A6NH11 291 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 AHCYL1O43865 530 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CCNT2O60583 730 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 H2AFYO75367 372 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 DAB1O75553 588 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PROCP04070 461 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 FESP07332 822 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 GOT1P17174 413 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CRABP2P29373 138 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 GP5P40197 560 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 GRIA1P42261 906 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 MAGEA12P43365 314 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 HARS2P49590 506 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 AIF1P55008 147 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 DSG1Q02413 1049 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 C9orf57Q5W0N0 161 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 TAPT1Q6NXT6 567 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 ALKAL1Q6UXT8 129 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 DTX3LQ8TDB6 740 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 SREK1Q8WXA9 508 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 ARNTL2Q8WYA1 636 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 GATA6Q92908 595 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 CMTM5Q96DZ9 223 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 SYT15Q9BQS2 421 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 VCX3BQ9H321 246 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 KRT82Q9NSB4 513 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 UBQLN1Q9UMX0 589 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 RNF103O00237 685 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 XPOTO43592 962 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 COPAP53621 1224 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 XIAPP98170 497 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PDE1BQ01064 536 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 DEUP1Q05D60 604 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PAFAH1B3Q15102 231 aaKnown RBP8.53□□□□□ -1.04
CHD7-202ENST00000524602 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 PPP1R16BQ96T49 567 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 EBF4Q9BQW3 602 aa8.53□□□□□ -1.04
CHD7-202ENST00000524602 ZNF395Q9H8N7 513 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms