RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CEP295NLQ96MC4 621 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 SEPT5Q99719 369 aaPredicted RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 KXD1Q9BQD3 176 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 RPP25Q9BUL9 199 aaKnown RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 DDX23Q9BUQ8 820 aaKnown RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 PABPC3Q9H361 631 aaKnown RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 KCNK12Q9HB15 430 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 PCDH9Q9HC56 1237 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 CNGB3Q9NQW8 809 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 ABI2Q9NYB9 513 aaPredicted RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 AFF4Q9UHB7 1163 aaKnown RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 CHORDC1Q9UHD1 332 aaPredicted RBP7.34□□□□□ -1.23
VPS11-201ENST00000524454 STAP1Q9ULZ2 295 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 SORCS3Q9UPU3 1222 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 SHOC2Q9UQ13 582 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 USTQ9Y2C2 406 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 TECTAO75443 2155 aa7.34□□□□□ -1.23
VPS11-201ENST00000524454 PTPRDP23468 1912 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 DENND4CQ5VZ89 1909 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 KIF26AQ9ULI4 1882 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 ESYT3A0FGR9 886 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 LRRD1A4D1F6 860 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ZSCAN5CA6NGD5 496 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 OR6C75A6NL08 312 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 SRRM3A6NNA2 597 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 HMGB1P1B2RPK0 211 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 GOLGA8SH3BPF8 625 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 AGPSO00116 658 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 GPR37L1O60883 481 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 TCEA3O75764 348 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 PAPLNO95428 1278 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 TRUB2O95900 331 aaKnown RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 C1RP00736 705 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 LAMP2P13473 410 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 TSHRP16473 764 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 KDELR1P24390 212 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 LMO2P25791 158 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 MIPP30301 263 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 HOXA9P31269 272 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 STIP1P31948 543 aaKnown RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 HTR7P34969 479 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 NOS2P35228 1153 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 NR2C2P49116 596 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ARSEP51690 589 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 YWHAZP63104 245 aaKnown RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 GPR17Q13304 367 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 XRCC4Q13426 336 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 MORF4L2Q15014 288 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 SLC25A52Q3SY17 297 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 C2CD6Q53TS8 623 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ACBD5Q5T8D3 534 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 TPGS2Q68CL5 300 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 OR6B2Q6IFH4 312 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 FAM171BQ6P995 826 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 RHBDF2Q6PJF5 856 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ZDHHC24Q6UX98 284 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 MFSD7Q6UXD7 560 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 C4orf50Q6ZRC1 276 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 CYP4V2Q6ZWL3 525 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 BZW1Q7L1Q6 419 aaKnown RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 THEM5Q8N1Q8 247 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ALLCQ8N6M5 410 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ARFGAP1Q8N6T3 406 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 C12orf29Q8N999 325 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 FBXO25Q8TCJ0 367 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 SLC2A14Q8TDB8 520 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 RXFP2Q8WXD0 754 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 FGF14Q92915 247 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 NTAN1Q96AB6 310 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 HAUS1Q96CS2 278 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 RTP4Q96DX8 246 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ASIC4Q96FT7 647 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 SMARCD1Q96GM5 515 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 FUBP3Q96I24 572 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS11-201ENST00000524454 SLC2A13Q96QE2 648 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 SYT15Q9BQS2 421 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 ZCWPW1Q9H0M4 648 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 STMN4Q9H169 189 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 ZNF334Q9HCZ1 680 aaPredicted RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 DDX43Q9NXZ2 648 aaKnown RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 MAP10Q9P2G4 905 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 EPS15L1Q9UBC2 864 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 CDH7Q9ULB5 785 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 MRPS23Q9Y3D9 190 aaKnown RBP7.33□□□□□ -1.24
VPS11-201ENST00000524454 NME7Q9Y5B8 376 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 RAD54BQ9Y620 910 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 NUMBLQ9Y6R0 609 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 PATJQ8NI35 1801 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 TICRRQ7Z2Z1 1910 aa7.33□□□□□ -1.24
VPS11-201ENST00000524454 TCRBV7S2A1N4TA0A589 114 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 MYBPHLA2RUH7 354 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 MCF2LO15068 1137 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 EIF3HO15372 352 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS11-201ENST00000524454 MOSPD3O75425 235 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SYF2O95926 243 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms