RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 RRAGAQ7L523 313 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 ENOSF1Q7L5Y1 443 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 GLRX5Q86SX6 157 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 SCUBE3Q8IX30 993 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 ERLEC1Q96DZ1 483 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 FCRL2Q96LA5 508 aaPredicted RBP13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 SERPINB11Q96P15 392 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 KIAA1522Q9P206 1035 aaPredicted RBP13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 SCML1Q9UN30 329 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 PCDHGB2Q9Y5G2 931 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 GTF3C3Q9Y5Q9 886 aa13.14□□□□□ -0.31
TOP1MT-217ENST00000523417 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 SPAARA0A1B0GVQ0 90 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 MEI4A8MW99 385 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 C10orf142B7Z368 130 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 TBL1XO60907 577 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 FGFR1OPO95684 399 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 TOP3BO95985 862 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 ASLP04424 464 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 HLA-EP13747 358 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 POLR2EP19388 210 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 SGSHP51688 502 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 RPS14P62263 151 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 FAM193AP78312 1265 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 BNC1Q01954 994 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 GRIK2Q13002 908 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 TRIP6Q15654 476 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 RFWD3Q6PCD5 774 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 USP30Q70CQ3 517 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 RAB44Q7Z6P3 723 aaPredicted RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 HJURPQ8NCD3 748 aaPredicted RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 DQX1Q8TE96 717 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 CLEC4CQ8WTT0 213 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 MYO19Q96H55 970 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 SRRTQ9BXP5 876 aaKnown RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 RSPH9Q9H1X1 276 aaPredicted RBP13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 LHX5Q9H2C1 402 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
TOP1MT-217ENST00000523417 TARSL2A2RTX5 802 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 MED7O43513 233 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 SH3BP5O60239 455 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 CAPNS1P04632 268 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 CD70P32970 193 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 ACSL1P33121 698 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 YWHAZP63104 245 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 SFSWAPQ12872 951 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 PAK1Q13153 545 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 OR2I1PQ8NGU4 316 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 MED15Q96RN5 788 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 BTBD1Q9H0C5 482 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 INTS2Q9H0H0 1204 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 EIF2B4Q9UI10 523 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 INTS6Q9UL03 887 aaKnown RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 ZMIZ1Q9ULJ6 1067 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
TOP1MT-217ENST00000523417 PAPSS1O43252 624 aaPredicted RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 HYAL3O43820 417 aaPredicted RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 DKK1O94907 266 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 CER1O95813 267 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 GLI1P08151 1106 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 SPINK2P20155 84 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 HLA-BQ31612 363 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 SYPL2Q5VXT5 272 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 MFN1Q8IWA4 741 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 MRGPRX3Q96LB0 322 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 MIS12Q9H081 205 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 THAP9Q9H5L6 903 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 GAREM1Q9H706 876 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 POPDC2Q9HBU9 364 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 UBE2TQ9NPD8 197 aaPredicted RBP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 ASNSD1Q9NWL6 643 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 RWDD2AQ9UIY3 292 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 PCOLCE2Q9UKZ9 415 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 CKAP5Q14008 2032 aa13.11□□□□□ -0.31
TOP1MT-217ENST00000523417 CEP192Q8TEP8 1941 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 GTPBP10A4D1E9 387 aaKnown RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 PIK3R2O00459 728 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 SEMA4FO95754 770 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 CALCAP01258 141 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms