RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CER1O95813 267 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 MOCS2O96007 188 aaPredicted RBP16.04■□□□□ 0.16
MRPS28-209ENST00000522987 IGLV3-19P01714 112 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 DNTTP04053 509 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 POLR2EP19388 210 aaKnown RBP16.04■□□□□ 0.16
MRPS28-209ENST00000522987 TBXAS1P24557 533 aaPredicted RBP16.04■□□□□ 0.16
MRPS28-209ENST00000522987 RPS24P62847 133 aaKnown RBP16.04■□□□□ 0.16
MRPS28-209ENST00000522987 RING1Q06587 406 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 KIF19Q2TAC6 998 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 FAM133BQ5BKY9 247 aaKnown RBP16.04■□□□□ 0.16
MRPS28-209ENST00000522987 PIK3R6Q5UE93 754 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 MSANTD2Q6P1R3 559 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 C19orf48Q6RUI8 117 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 LCLAT1Q6UWP7 414 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 MFN1Q8IWA4 741 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 AHI1Q8N157 1196 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 SLC35F5Q8WV83 523 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 BIRC7Q96CA5 298 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 PRICKLE1Q96MT3 831 aaPredicted RBP16.04■□□□□ 0.16
MRPS28-209ENST00000522987 GSDMAQ96QA5 445 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 ZDHHC5Q9C0B5 715 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 LHX6Q9UPM6 363 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 WDFY3Q8IZQ1 3526 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 ACSL4O60488 711 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 CBFA2T3O75081 653 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 DLDP09622 509 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 ATXN1LP0C7T5 689 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 CTSOP43234 321 aaPredicted RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 STX17P56962 302 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 LRRC63Q05C16 580 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 HNRNPDQ14103 355 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 KCNT1Q5JUK3 1230 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 ENGASEQ8NFI3 743 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 C1orf216Q8TAB5 229 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 RHBDD1Q8TEB9 315 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 ADAMTS14Q8WXS8 1223 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 FAM149B1Q96BN6 582 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 NUCKS1Q9H1E3 243 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 TM9SF3Q9HD45 589 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 ST7Q9NRC1 585 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 XPO7Q9UIA9 1087 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 STOML2Q9UJZ1 356 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 MAN1B1Q9UKM7 699 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 CTNND2Q9UQB3 1225 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
MRPS28-209ENST00000522987 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 DSPP15924 2871 aaKnown RBP16.03■□□□□ 0.16
MRPS28-209ENST00000522987 MYLKQ15746 1914 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 BIN1O00499 593 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 PSMA7O14818 248 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 IGLV3-27P01718 113 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 ATP5BP06576 529 aaKnown RBP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 PAEPP09466 180 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 CSKP41240 450 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 SLC11A2P49281 568 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 E2F5Q15329 346 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 FSCBQ5H9T9 825 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 PRAMEF14Q5SWL7 426 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 ZNF776Q68DI1 518 aaPredicted RBP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 KIAA0907Q7Z7F0 614 aaPredicted RBP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 SCUBE3Q8IX30 993 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 MDM1Q8TC05 714 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 DQX1Q8TE96 717 aaKnown RBP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 GOLGA1Q92805 767 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 BTBD1Q9H0C5 482 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 SERGEFQ9UGK8 458 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 INTS6Q9UL03 887 aaKnown RBP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 APOBEC2Q9Y235 224 aaKnown RBP16.02■□□□□ 0.16
MRPS28-209ENST00000522987 ANKRD6Q9Y2G4 727 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.16
MRPS28-209ENST00000522987 TDRD6O60522 2096 aaKnown RBP16.02■□□□□ 0.15
MRPS28-209ENST00000522987 SIN3BO75182 1162 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 LATS1O95835 1130 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 FYNP06241 537 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 KRT5P13647 590 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 AFF3P51826 1226 aaKnown RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 ZNF445P59923 1031 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 STIM1Q13586 685 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 COL9A2Q14055 689 aaPredicted RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 CNGA2Q16280 664 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 TTC31Q49AM3 519 aaPredicted RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 COBLL1Q53SF7 1204 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 ADAT2Q7Z6V5 191 aaKnown RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 HJURPQ8NCD3 748 aaPredicted RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 LMO3Q8TAP4 145 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 NELFBQ8WX92 580 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 FCRL2Q96LA5 508 aaPredicted RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 METTL14Q9HCE5 456 aaKnown RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 KIAA1257Q9ULG3 409 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 CEP83Q9Y592 693 aa16.01■□□□□ 0.15
MRPS28-209ENST00000522987 ANKRD11Q6UB99 2663 aaPredicted RBP16.01■□□□□ 0.15
MRPS28-209ENST00000522987 FAM149AA5PLN7 773 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 TTC34A8MYJ7 566 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 H0Y8X5 98 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 MID1O15344 667 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 ST8SIA6P61647 398 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms