RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 O00370 1275 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 MAP3K13O43283 966 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 COMTP21964 271 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 RRM1P23921 792 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 SCNN1AP37088 669 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 PTGER3P43115 390 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 SEC13P55735 322 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
MRPS28-208ENST00000521605 ZNF268Q14587 947 aaPredicted RBP11.32□□□□□ -0.6
MRPS28-208ENST00000521605 FBXO43Q4G163 708 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 ARHGAP17Q68EM7 881 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
MRPS28-208ENST00000521605 LPCAT2Q7L5N7 544 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 MAATS1Q7Z4T9 603 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 CRYBG2Q8N1P7 616 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 TMEM130Q8N3G9 435 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 TOP6BLQ8N6T0 577 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 FRMD1Q8N878 549 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 ATAD1Q8NBU5 361 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 OR2I1PQ8NGU4 316 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 RLN3Q8WXF3 142 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 PSMG2Q969U7 264 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 CAMK1GQ96NX5 476 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 GCNAQ96QF7 691 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 NCAPGQ9BPX3 1015 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 SLC46A2Q9BY10 475 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 SDCBP2Q9H190 292 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.6
MRPS28-208ENST00000521605 STIM2Q9P246 746 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 NXF1Q9UBU9 619 aaKnown RBP11.32□□□□□ -0.6
MRPS28-208ENST00000521605 IP6K2Q9UHH9 426 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.32□□□□□ -0.67e-6■■■■■ 27.7
MRPS28-208ENST00000521605 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
MRPS28-208ENST00000521605 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 CEP104O60308 925 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 FGF19O95750 216 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 CD58P19256 250 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 CXCR5P32302 372 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 RPL9P32969 192 aaKnown RBP11.31□□□□□ -0.6
MRPS28-208ENST00000521605 GJA4P35212 333 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 PTPN7P35236 360 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 TAF6P49848 677 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 RWDD2BP57060 319 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 NNTQ13423 1086 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
MRPS28-208ENST00000521605 PIGHQ14442 188 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-208ENST00000521605 CYP1B1Q16678 543 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 SV2CQ496J9 727 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 SGO2Q562F6 1265 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 C2orf27AQ580R0 203 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 BEND6Q5SZJ8 279 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-208ENST00000521605 C8orf74Q6P047 294 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 ARCQ7LC44 396 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 POLNQ7Z5Q5 900 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 ERICH1Q86X53 443 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 ZDHHC17Q8IUH5 632 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 SYT12Q8IV01 421 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 WDTC1Q8N5D0 677 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 MDGA1Q8NFP4 955 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 TFAP2BQ92481 460 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 PNKPQ96T60 521 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 SEPT5Q99719 369 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-208ENST00000521605 FAM129AQ9BZQ8 928 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 ANAPC7Q9UJX3 599 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 L1RE1Q9UN81 338 aa11.31□□□□□ -0.6
MRPS28-208ENST00000521605 KIAA1549LQ6ZVL6 1849 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 MTMR11A4FU01 709 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 ANTXRLA6NF34 631 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 SIGLEC16A6NMB1 481 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 MAP2K7O14733 419 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 SPOPO43791 374 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 OPHN1O60890 802 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 BRD2P25440 801 aaKnown RBP11.3□□□□□ -0.6
MRPS28-208ENST00000521605 AVPR1AP37288 418 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
MRPS28-208ENST00000521605 DRG2P55039 364 aaKnown RBP11.3□□□□□ -0.6
MRPS28-208ENST00000521605 COPS2P61201 443 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 VSNL1P62760 191 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 CUL1Q13616 776 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 MESDQ14696 234 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 TAF12Q16514 161 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 PKDCCQ504Y2 493 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 SEL1L2Q5TEA6 688 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
MRPS28-208ENST00000521605 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 ITIH5Q86UX2 942 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1113.9 ms