RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 SIX5Q8N196 739 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 ALG3Q92685 438 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 ZWILCHQ9H900 591 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 ARHGEF3Q9NR81 526 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 SPHK2Q9NRA0 654 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 WNT16Q9UBV4 365 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 AMFRQ9UKV5 643 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 AP4E1Q9UPM8 1137 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 NEU3Q9UQ49 428 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 PIAS3Q9Y6X2 628 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 TRIOO75962 3097 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 GOLGA6L7A0A1B0GV03 622 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 PI4K2BG5E9Z4 385 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ENC1O14682 589 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 TRDMT1O14717 391 aaKnown RBP15.84■□□□□ 0.13
LSM1-203ENST00000520755 ACSL4O60488 711 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 PAGE1O75459 146 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 LATS1O95835 1130 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ADH1CP00326 375 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ATP1A1P05023 1023 aaKnown RBP15.84■□□□□ 0.13
LSM1-203ENST00000520755 TNNT1P13805 278 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 DESP17661 470 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ADRA1BP35368 520 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 SSR1P43307 286 aaKnown RBP15.84■□□□□ 0.13
LSM1-203ENST00000520755 PEX5P50542 639 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ARSEP51690 589 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 GNG11P61952 73 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 NR1H3Q13133 447 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 SEMA3BQ13214 749 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ANO4Q32M45 955 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 FAM133BQ5BKY9 247 aaKnown RBP15.84■□□□□ 0.13
LSM1-203ENST00000520755 ADGRF1Q5T601 910 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 LRRC38Q5VT99 294 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 RHBDF2Q6PJF5 856 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 TPRG1Q6ZUI0 275 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 TMEM25Q86YD3 366 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 PYROXD2Q8N2H3 581 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 ATP6V0D2Q8N8Y2 350 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 TEKT4Q8WW24 435 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 BHMTQ93088 406 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 BTN2A3PQ96KV6 586 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 KCTD15Q96SI1 283 aaPredicted RBP15.84■□□□□ 0.13
LSM1-203ENST00000520755 NCAPGQ9BPX3 1015 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 WDCPQ9H6R7 721 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 SLC12A6Q9UHW9 1150 aa15.84■□□□□ 0.13
LSM1-203ENST00000520755 KRBA1A5PL33 1030 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 SPECC1L-ADORA2AF8WAN1 911 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 FAM72CH0Y354 149 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 TSPAN3O60637 253 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 ADH5P11766 374 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
LSM1-203ENST00000520755 SLC6A4P31645 630 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 CTHP32929 405 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 GJA4P35212 333 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 CHKAP35790 457 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 AIF1P55008 147 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 ETF1P62495 437 aaKnown RBP15.83■□□□□ 0.12
LSM1-203ENST00000520755 HADHQ16836 314 aaKnown RBP15.83■□□□□ 0.12
LSM1-203ENST00000520755 ERMARDQ5T6L9 678 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 FAM72AQ5TYM5 149 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 FAM72DQ6L9T8 149 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 TRIM67Q6ZTA4 783 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 ANKS1BQ7Z6G8 1248 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 FAM72BQ86X60 149 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 RHOT1Q8IXI2 618 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 ZNF683Q8IZ20 524 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 CPXM2Q8N436 756 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 FAM71BQ8TC56 605 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 HSPH1Q92598 858 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 AZIN2Q96A70 460 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 MYEOVQ96EZ4 313 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 P2RY11Q96G91 374 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 PRMT1Q99873 361 aaKnown RBP15.83■□□□□ 0.12
LSM1-203ENST00000520755 EPHX3Q9H6B9 360 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.83■□□□□ 0.12
LSM1-203ENST00000520755 PCDHA3Q9Y5H8 950 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 HS3ST4Q9Y661 456 aa15.83■□□□□ 0.12
LSM1-203ENST00000520755 SHROOM3Q8TF72 1996 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 NUP205Q92621 2012 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 CCDC66A2RUB6 948 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 C3orf70A6NLC5 250 aaPredicted RBP15.82■□□□□ 0.12
LSM1-203ENST00000520755 MIF4GDA9UHW6 222 aaKnown RBP15.82■□□□□ 0.12
LSM1-203ENST00000520755 ESPNB1AK53 854 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 NEDD8-MDP1E9PL57 170 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 GFRA2O00451 464 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 CD48P09326 243 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 CD72P21854 359 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 DNA2P51530 1060 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 PRKCQQ04759 706 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 GAD2Q05329 585 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 DPYSL2Q16555 572 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 MS4A13Q5J8X5 152 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 MANEALQ5VSG8 457 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 RAP1GAP2Q684P5 730 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 RFWD3Q6PCD5 774 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 CHSY1Q86X52 802 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 KATNAL2Q8IYT4 538 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 DDI1Q8WTU0 396 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms