RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TTC39CQ8N584 583 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 ANKRD52Q8NB46 1076 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 SLC4A11Q8NBS3 891 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 FBXL13Q8NEE6 735 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 PIGKQ92643 395 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 BHMTQ93088 406 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 CCDC34Q96HJ3 373 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 TMEM176AQ96HP8 235 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 XPO6Q96QU8 1125 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 ACOX2Q99424 681 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 SLC30A3Q99726 388 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 EDEM2Q9BV94 578 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 BBS2Q9BXC9 721 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 DNAI2Q9GZS0 605 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 FAM124BQ9H5Z6 455 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 C12orf49Q9H741 205 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 EVLQ9UI08 416 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 NAGPAQ9UK23 515 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 COQ4Q9Y3A0 265 aa9.73□□□□□ -0.85
CTNNA1-221ENST00000520339 TCHHQ07283 1943 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 ATG2BQ96BY7 2078 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 NEDD8-MDP1E9PL57 170 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 STX10O60499 249 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 PENKP01210 267 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 RALAP11233 206 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 HOXB2P14652 356 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 GABRG2P18507 467 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 WASP42768 502 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 PTGER3P43115 390 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 PMS1P54277 932 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 COG7P83436 770 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 FKBP3Q00688 224 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 CBWD6Q4V339 395 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 RAB41Q5JT25 222 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 CBWD3Q5JTY5 395 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 CBWD5Q5RIA9 395 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 ANKRD40Q6AI12 368 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 NXPE4Q6UWF7 544 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 RAB44Q7Z6P3 723 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 TADA2BQ86TJ2 420 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 PIGZQ86VD9 579 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 TMEFF1Q8IYR6 380 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 ENGASEQ8NFI3 743 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 SPATA20Q8TB22 786 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 GSDMAQ96QA5 445 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 CDK5RAP1Q96SZ6 601 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 GABRG3Q99928 467 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 TMEM74BQ9NUR3 256 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 RMND1Q9NWS8 449 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 ATXN7L1Q9ULK2 861 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 ZNF510Q9Y2H8 683 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
CTNNA1-221ENST00000520339 GFRA2O00451 464 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 SLC16A3O15427 465 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 ERCC5P28715 1186 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 DGKGP49619 791 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 SHC2P98077 582 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 ZNF658Q5TYW1 1059 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 DAB2IPQ5VWQ8 1189 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 FYB2Q5VWT5 728 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 PEAR1Q5VY43 1037 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 PM20D1Q6GTS8 502 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 PSAPL1Q6NUJ1 521 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 KIAA1211LQ6NV74 962 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 ARMCX6Q7L4S7 300 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 BHLHA9Q7RTU4 235 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 SYT12Q8IV01 421 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 CHPFQ8IZ52 775 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 ARHGAP18Q8N392 663 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 OR13H1Q8NG92 308 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 IPO4Q8TEX9 1081 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 NDRG1Q92597 394 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 CRELD1Q96HD1 420 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 DCLK3Q9C098 648 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 TMEM9BQ9NQ34 198 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 PLK2Q9NYY3 685 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 CALCOCO1Q9P1Z2 691 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 RASAL2Q9UJF2 1139 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 PILRBQ9UKJ0 227 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 AGO1Q9UL18 857 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 SLC27A6Q9Y2P4 619 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 ABCA7Q8IZY2 2146 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 GON4LQ3T8J9 2241 aa9.71□□□□□ -0.86
CTNNA1-221ENST00000520339 DENND4CQ5VZ89 1909 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 ANAPC1Q9H1A4 1944 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 IGHV1OR15-9A0A0B4J2B8 117 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 CDC14CA4D256 554 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 TULP2O00295 520 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 SMC2O95347 1197 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 EDN3P14138 238 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 ITPKAP23677 461 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 CORO1AP31146 461 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 HOXD12P35452 270 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 DPP6P42658 865 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 NOVA1P51513 510 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 MFAP3P55082 362 aa9.7□□□□□ -0.86
CTNNA1-221ENST00000520339 YWHAGP61981 247 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms