RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 KIAA1614Q5VZ46 1190 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 DGAT2L7PQ6IED9 249 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 NEK8Q86SG6 692 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 EXD3Q8N9H8 876 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 THAP4Q8WY91 577 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 CPT1BQ92523 772 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SEPSECSQ9HD40 501 aaKnown RBP6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SAYSD1Q9NPB0 183 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 G6PC2Q9NQR9 355 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 NDUFAF4Q9P032 175 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 KCND3Q9UK17 655 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 RCE1Q9Y256 329 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 GPR52Q9Y2T5 361 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SPATA31A5Q5VU36 1347 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SPATA31A7Q8IWB4 1347 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SMIM35A0A1B0GVV1 85 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 AGAP5A6NIR3 686 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 BCAR3O75815 825 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 ADD2P35612 726 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 RPS6KA2Q15349 733 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 TAF5Q15542 800 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 TBRG1Q3YBR2 411 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 RBM44Q6ZP01 1051 aaKnown RBP6.89□□□□□ -1.31
PTPN12-213ENST00000519553 RILPL2Q969X0 211 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 ARHGAP39Q9C0H5 1083 aa6.89□□□□□ -1.31
PTPN12-213ENST00000519553 TAF1DQ9H5J8 278 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-213ENST00000519553 COPG1Q9Y678 874 aaKnown RBP6.89□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3DA0A087WVF3 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3IA0A087WXS9 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3EA0A087X179 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3KA0A087X1G2 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3BA6NDS4 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3FA6NER0 549 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3LB9A6J9 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 INPPL1O15357 1258 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 CNTN5O94779 1100 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 PLAUP00749 431 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3HP0C7X1 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 ST6GAL1P15907 406 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 HOXA7P31268 230 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 SHC2P98077 582 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 SRSF4Q08170 494 aaKnown RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 CUL4BQ13620 913 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 SMAD1Q15797 465 aaKnown RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3GQ6DHY5 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3CQ6IPX1 549 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 SLC18B1Q6NT16 456 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 MIS18BP1Q6P0N0 1132 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 ZNF474Q6S9Z5 364 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 YTHDF3Q7Z739 585 aaKnown RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 MOGAT3Q86VF5 341 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 ZNF575Q86XF7 245 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 RHPN2Q8IUC4 686 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 EXOC8Q8IYI6 725 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 C16orf71Q8IYS4 520 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TBC1D3Q8IZP1 549 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 SRFBP1Q8NEF9 429 aaKnown RBP6.88□□□□□ -1.31
PTPN12-213ENST00000519553 OR6Y1Q8NGX8 325 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 CSGALNACT1Q8TDX6 532 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 TWSG1Q9GZX9 223 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 PRDM16Q9HAZ2 1276 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 ITM2CQ9NQX7 267 aa6.88□□□□□ -1.31
PTPN12-213ENST00000519553 B9A039 149 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 ENO1P06733 434 aaKnown RBP6.87□□□□□ -1.31
PTPN12-213ENST00000519553 RPS6KB1P23443 525 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 ATP5F1P24539 256 aaPredicted RBP6.87□□□□□ -1.31
PTPN12-213ENST00000519553 ARHGAP25P42331 645 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 RCAN1P53805 252 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 DCTN1Q14203 1278 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 FAM110CQ1W6H9 321 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 GLE1Q53GS7 698 aaKnown RBP6.87□□□□□ -1.31
PTPN12-213ENST00000519553 KIAA1324Q6UXG2 1013 aaKnown RBP6.87□□□□□ -1.31
PTPN12-213ENST00000519553 SPPL3Q8TCT6 385 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 RUBCNQ92622 972 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 PIGKQ92643 395 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 NPAS1Q99742 590 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 FAM118BQ9BPY3 351 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 FEM1BQ9UK73 627 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 PCDHA10Q9Y5I2 948 aa6.87□□□□□ -1.31
PTPN12-213ENST00000519553 EMSYQ7Z589 1322 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 CYP2D7A0A087X1C5 515 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 SLC22A23A1A5C7 686 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 E7EVH7 732 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 DSCR3O14972 297 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 SGPL1O95470 568 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 PRR35P0CG20 571 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 MTA1Q13330 715 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 CCDC142Q17RM4 750 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 PAPD7Q5XG87 772 aaKnown RBP6.86□□□□□ -1.31
PTPN12-213ENST00000519553 TMEM88Q6PEY1 159 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 DHRS13Q6UX07 377 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 RTL10Q7L3V2 364 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 ADPRHL1Q8NDY3 354 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 ZFPM2Q8WW38 1151 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 ATP2A3Q93084 1043 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 FAM167BQ9BTA0 163 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 HTATIP2Q9BUP3 242 aa6.86□□□□□ -1.31
PTPN12-213ENST00000519553 KIF17Q9P2E2 1029 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms