RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PP2D1A8MPX8 630 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 KPNA7A9QM74 516 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 LEFTY2O00292 366 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 GABRDO14764 452 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 PRB1P04280 392 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CFIP05156 583 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CKMP06732 381 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SYPP08247 313 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 ZNF883P0CG24 379 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 PLA2G2AP14555 144 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 HDCP19113 662 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 GRIA2P42262 883 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 MAGEA11P43364 429 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 TRAPPC10P48553 1259 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 ZNF131P52739 623 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 RPL10AP62906 217 aaKnown RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 BNC1Q01954 994 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 TMEM132DQ14C87 1099 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 TAF12Q16514 161 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CCDC142Q17RM4 750 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 TTC38Q5R3I4 469 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 LMBRD2Q68DH5 695 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CRELD2Q6UXH1 353 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SLC36A4Q6YBV0 504 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CENPQQ7L2Z9 268 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 FILIP1Q7Z7B0 1213 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 METTL23Q86XA0 190 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 MIB1Q86YT6 1006 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 NAXDQ8IW45 347 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SMYD4Q8IYR2 804 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 PDCL2Q8N4E4 241 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 DEFB119Q8N690 84 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SYT2Q8N9I0 419 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 LSM14AQ8ND56 463 aaKnown RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SPATA18Q8TC71 538 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SNX29Q8TEQ0 813 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 HMGB4Q8WW32 186 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 ASB11Q8WXH4 323 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 DNASE2BQ8WZ79 361 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 WDR89Q96FK6 387 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 FUBP3Q96I24 572 aaKnown RBP eCLIP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 SPATA17Q96L03 361 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 DMRTB1Q96MA1 342 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CEP295NLQ96MC4 621 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 HEXIM2Q96MH2 286 aaKnown RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CITED4Q96RK1 184 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 PNKPQ96T60 521 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 DUSP9Q99956 384 aaKnown RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 TTLL2Q9BWV7 592 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 FOXP1Q9H334 677 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 PRORYQ9H606 182 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 ASB7Q9H672 318 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 C19orf73Q9NVV2 129 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 KCND2Q9NZV8 630 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 CALCOCO1Q9P1Z2 691 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 MAGED2Q9UNF1 606 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-207ENST00000518716 NFE2L3Q9Y4A8 694 aa6.41□□□□□ -1.38
PABPC1-207ENST00000518716 NPHP3-ACAD11A0A0J9YXS1 232 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 TCRBV21S2A2A0A5A6 115 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ZNF840PA6NDX5 716 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 TRABD2BA6NFA1 517 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 MYMKA6NI61 221 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ANKRD63C9JTQ0 380 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 HCRTO43612 131 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 B3GALT4O96024 378 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 OAS1P00973 400 aaKnown RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ATXN1LP0C7T5 689 aaKnown RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 TMEM253P0C7T8 217 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 SCP2P22307 547 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ADSSP30520 456 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ATXN3P54252 364 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ATP2C1P98194 919 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 RPL6Q02878 288 aaKnown RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 EHHADHQ08426 723 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 CYP4F3Q08477 520 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 RAD51AP2Q09MP3 1159 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 SMAD1Q15797 465 aaKnown RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 PCSK4Q6UW60 755 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 OSTM1Q86WC4 334 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 MARCH9Q86YJ5 346 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 CCNJLQ8IV13 435 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 TRIML1Q8N9V2 468 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 GABRG3Q99928 467 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ZDHHC5Q9C0B5 715 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 TRPC7Q9HCX4 862 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 ZDHHC4Q9NPG8 344 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 GDAP2Q9NXN4 497 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 DPP3Q9NY33 737 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 GTF3C4Q9UKN8 822 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 L1RE1Q9UN81 338 aa6.4□□□□□ -1.38
PABPC1-207ENST00000518716 APOBEC2Q9Y235 224 aaKnown RBP6.4□□□□□ -1.38
PABPC1-207ENST00000518716 NUMA1Q14980 2115 aa6.4□□□□□ -1.39
PABPC1-207ENST00000518716 NBPF19A0A087WUL8 3843 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TISP43B9A030 160 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 H0YCG3 227 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 SLC9A3R1O14745 358 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 HNRNPDLO14979 420 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms