RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PGFP49763 221 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 PARP6Q2NL67 630 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 CTXN3Q4LDR2 81 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 FAM171A1Q5VUB5 890 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 ZNF567Q8N184 647 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 C4orf33Q8N1A6 199 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 NPWQ8N729 165 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 APBB2Q92870 758 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 SMOC2Q9H3U7 446 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 SAGE1Q9NXZ1 904 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 SMG5Q9UPR3 1016 aaKnown RBP27.32■■□□□ 1.96
COL13A1-210ENST00000517713 TTLL3Q9Y4R7 772 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 ALDH2P05091 517 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 GSTA2P09210 222 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 GRIA1P42261 906 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 SLC18A1P54219 525 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 BRMS1LQ5PSV4 323 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 C8orf48Q96LL4 319 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 BRD8Q9H0E9 1235 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 EIF2B3Q9NR50 452 aaKnown RBP27.31■■□□□ 1.96
COL13A1-210ENST00000517713 PCDHB5Q9Y5E4 795 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 IKBKGQ9Y6K9 419 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 TRDMT1O14717 391 aaKnown RBP27.31■■□□□ 1.96
COL13A1-210ENST00000517713 TRIM66O15016 1216 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 MYCP01106 439 aaPredicted RBP27.31■■□□□ 1.96
COL13A1-210ENST00000517713 SERPINB6P35237 376 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 PPIDQ08752 370 aaKnown RBP27.31■■□□□ 1.96
COL13A1-210ENST00000517713 NUP93Q8N1F7 819 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 SLC44A1Q8WWI5 657 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 EBNA1BP2Q99848 306 aaKnown RBP27.31■■□□□ 1.96
COL13A1-210ENST00000517713 SFMBT1Q9UHJ3 866 aa27.31■■□□□ 1.96
COL13A1-210ENST00000517713 A0A1W2PQH9 124 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 MX2P20592 715 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 HTRA3P83110 453 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 MRPL58Q14197 206 aaKnown RBP27.3■■□□□ 1.96
COL13A1-210ENST00000517713 DDR2Q16832 855 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 TCTN1Q2MV58 587 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 SDHAF4Q5VUM1 108 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 PRPF39Q86UA1 669 aaKnown RBP27.3■■□□□ 1.96
COL13A1-210ENST00000517713 CACNA2D3Q8IZS8 1091 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 PDCD7Q8N8D1 485 aaKnown RBP27.3■■□□□ 1.96
COL13A1-210ENST00000517713 MZB1Q8WU39 189 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 CASP10Q92851 521 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 HAPLN3Q96S86 360 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 GPR62Q9BZJ7 368 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 NMUR1Q9HB89 426 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 SCML2Q9UQR0 700 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 MAD1L1Q9Y6D9 718 aa27.3■■□□□ 1.96
COL13A1-210ENST00000517713 KCNK1O00180 336 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 MLNP12872 115 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PSMB4P28070 264 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 GPR15P49685 360 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 FAM43BQ6ZT52 329 aaPredicted RBP27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PID1Q7Z2X4 250 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 MPP5Q8N3R9 675 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PGLYRP2Q96PD5 576 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 DEFB118Q96PH6 123 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 NSRP1Q9H0G5 558 aaKnown RBP27.29■■□□□ 1.96
COL13A1-210ENST00000517713 SIK2Q9H0K1 926 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PLAC1Q9HBJ0 212 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 IGSF9Q9P2J2 1179 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 OR6C75A6NL08 312 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 TCP11X1B4DZS4 312 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PQBP1O60828 265 aaKnown RBP27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PTPN3P26045 913 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 CCR1P32246 355 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 GALNT2Q10471 571 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 ZNF280DQ6N043 979 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 DENND1AQ8TEH3 1009 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 HDAC11Q96DB2 347 aa27.29■■□□□ 1.96
COL13A1-210ENST00000517713 SSU72Q9NP77 194 aaKnown RBP27.29■■□□□ 1.96
COL13A1-210ENST00000517713 PAK6Q9NQU5 681 aaPredicted RBP27.29■■□□□ 1.96
COL13A1-210ENST00000517713 VWA8A3KMH1 1905 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 IQANK1A0A1B0GTG1 560 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 INHBAP08476 426 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 SRGAP2BP0DMP2 458 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 KRT4P19013 534 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 GBP2P32456 591 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-210ENST00000517713 MAGEA11P43364 429 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 SLC11A1P49279 550 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 IL9RQ01113 521 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 LRRC8BQ6P9F7 803 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 UNC5AQ6ZN44 842 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 MON1AQ86VX9 555 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 STKLD1Q8NE28 680 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 MAGEB18Q96M61 343 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 FBXO44Q9H4M3 255 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 MARCH5Q9NX47 278 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 KLHL8Q9P2G9 620 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-210ENST00000517713 MYO16Q9Y6X6 1858 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 MSI1O43347 362 aaKnown RBP27.28■■□□□ 1.96
COL13A1-210ENST00000517713 HOXA2O43364 376 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 TYROBPO43914 113 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 APOEP02649 317 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 C1QAP02745 245 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 FGFR3P22607 806 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 PRKCHP24723 683 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 GARSP41250 739 aaKnown RBP27.28■■□□□ 1.96
COL13A1-210ENST00000517713 WDR4P57081 412 aaKnown RBP27.28■■□□□ 1.96
COL13A1-210ENST00000517713 NPAS4Q8IUM7 802 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms