RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 STMN1P16949 149 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF23P17027 643 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 HSPA6P17066 643 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATF7P17544 494 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACAT1P24752 427 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 GSTM2P28161 218 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRPAP1P30533 357 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 POLR2BP30876 1174 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 HNRNPH3P31942 346 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPAN7P41732 249 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 COPB1P53618 953 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 POLR2GP62487 172 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 RPP38P78345 283 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPY1Q01534 308 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ST3GAL1Q11201 340 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SMARCB1Q12824 385 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 RALGDSQ12967 914 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SPARCL1Q14515 664 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF846Q147U1 533 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 NFIL3Q16649 462 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRT24Q2M2I5 525 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SMU1Q2TAY7 513 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 Q3ZCU0 254 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 NADK2Q4G0N4 442 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 KCTD21Q4G0X4 260 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TIGD2Q4W5G0 525 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 VWA3BQ502W6 1294 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TIGD5Q53EQ6 642 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAVIN4Q5BKX8 364 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 METTL11BQ5VVY1 283 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 EGFLAMQ63HQ2 1017 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM91A1Q658Y4 838 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 DCLRE1AQ6PJP8 1040 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF704Q6ZNC4 412 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 USP43Q70EL4 1123 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 LPCAT2Q7L5N7 544 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRUNE1Q86TP1 453 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF589Q86UQ0 364 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF354CQ86Y25 554 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLITRK4Q8IW52 837 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF654Q8IZM8 581 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 XXYLT1Q8NBI6 393 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATAD1Q8NBU5 361 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 LHFPL5Q8TAF8 219 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 HM13Q8TCT9 377 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 WASF1Q92558 559 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC9A6Q92581 669 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTC17Q96AE7 1141 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC7A6OSQ96CW6 309 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATG4CQ96DT6 458 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ERLEC1Q96DZ1 483 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF486Q96H40 463 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 DNAJC1Q96KC8 554 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 B3GALT6Q96L58 329 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 KREMEN1Q96MU8 473 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTC25Q96NG3 672 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACAP3Q96P50 834 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 OPALINQ96PE5 141 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TGS1Q96RS0 853 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 FMO2Q99518 471 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 DDX50Q9BQ39 737 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 EFHD1Q9BUP0 239 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 MROQ9BYG7 248 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 GPR62Q9BZJ7 368 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 FOXP3Q9BZS1 431 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 WDR12Q9GZL7 423 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 MKRN2Q9H000 416 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLPBQ9H078 707 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYLK2Q9H1R3 596 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ADNPQ9H2P0 1102 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 NHEJ1Q9H9Q4 299 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 CPNE5Q9HCH3 593 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 IGSF5Q9NSI5 407 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SENP1Q9P0U3 644 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC7A8Q9UHI5 535 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 RWDD2AQ9UIY3 292 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZFP69BQ9UJL9 534 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 HAO1Q9UJM8 370 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 STOML2Q9UJZ1 356 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SMG5Q9UPR3 1016 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 MTO1Q9Y2Z2 717 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 PCDHA13Q9Y5I0 950 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SNX8Q9Y5X2 465 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 NCANO14594 1321 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 FRMPD4Q14CM0 1322 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 A2MP01023 1474 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NEO1Q92859 1461 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RFX7Q2KHR2 1363 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYH8P13535 1937 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SSU72P8A0A1W2PR75 194 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM86C2PA6NEL3 165 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRRIQ4A6NIV6 560 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 BTNL10A8MVZ5 291 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GOLGA8SH3BPF8 625 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TAF4O00268 1085 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLOCKO15516 846 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TEX33O43247 280 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GATCO43716 136 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DNAJC6O75061 913 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms