RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PRPSAP2O60256 369 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 CNTN5O94779 1100 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 LRIG2O94898 1065 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 PENKP01210 267 aaPredicted RBP10.22□□□□□ -0.77
CLN8-202ENST00000517514 HOXC13P31276 330 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 SLC1A1P43005 524 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 IFNAR2P48551 515 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 SLC11A2P49281 568 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 PEX5P50542 639 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TDGQ13569 410 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 RUNX3Q13761 415 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 DPYSL2Q16555 572 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TAZQ16635 292 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 ALFQ53S48 1182 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TJAP1Q5JTD0 557 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 DCAF12L1Q5VU92 463 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 SND1Q7KZF4 910 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLN8-202ENST00000517514 POLNQ7Z5Q5 900 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 DAAM2Q86T65 1068 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 CIR1Q86X95 450 aaPredicted RBP10.22□□□□□ -0.77
CLN8-202ENST00000517514 LGI2Q8N0V4 545 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 CFAP52Q8N1V2 620 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 OR52K2Q8NGK3 314 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TTC8Q8TAM2 541 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TEKT4Q8WW24 435 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 RAPGEF5Q92565 580 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 ALG3Q92685 438 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 IRF7Q92985 503 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 OTUB2Q96DC9 234 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 LMLNQ96KR4 655 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
CLN8-202ENST00000517514 ECT2Q9H8V3 914 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 ZWILCHQ9H900 591 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 PCDH18Q9HCL0 1135 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 SLC2A4RGQ9NR83 387 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 SPHK2Q9NRA0 654 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TMEM51Q9NW97 253 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 MARK1Q9P0L2 795 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 TBC1D14Q9P2M4 693 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 LCMT1Q9UIC8 334 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 FBXO10Q9UK96 956 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 VANGL2Q9ULK5 521 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 PACSIN2Q9UNF0 486 aaPredicted RBP10.22□□□□□ -0.77
CLN8-202ENST00000517514 ZNF510Q9Y2H8 683 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 ZKSCAN5Q9Y2L8 839 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 ANTXRLA6NF34 631 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 E9PAM4 449 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 SLC9A3R1O14745 358 aaPredicted RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 TRIM24O15164 1050 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 HOXC11O43248 304 aaPredicted RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 ZSCAN12O43309 604 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 CTNNA2P26232 953 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 HOXD9P28356 352 aaPredicted RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 GJC1P36383 396 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 OPRD1P41143 372 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 SOX9P48436 509 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 AIF1P55008 147 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 NAP1L1P55209 391 aaKnown RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 MMRN1Q13201 1228 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 PDGFRLQ15198 375 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 BOLA3Q53S33 107 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 MEI1Q5TIA1 1274 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 LRRC38Q5VT99 294 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 TPGS1Q6ZTW0 290 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 NLRP14Q86W24 1093 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 CHSY1Q86X52 802 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 PSTKQ8IV42 348 aaKnown RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 ETFBKMTQ8IXQ9 262 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 GJD3Q8N144 294 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 SLC35F6Q8N357 371 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 TXLNBQ8N3L3 684 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 PHTF2Q8N3S3 785 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 HSPH1Q92598 858 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 HES6Q96HZ4 224 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 NCAPGQ9BPX3 1015 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 HERPUD2Q9BSE4 406 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 TLR10Q9BXR5 811 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 KLC2Q9H0B6 622 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 DHX35Q9H5Z1 703 aaKnown RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 BRD9Q9H8M2 597 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 TRPV5Q9NQA5 729 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 NDFIP2Q9NV92 336 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 ETNK2Q9NVF9 386 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 THG1LQ9NWX6 298 aaKnown RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 PLK2Q9NYY3 685 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 MPP6Q9NZW5 540 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 CWC15Q9P013 229 aaKnown RBP10.21□□□□□ -0.77
CLN8-202ENST00000517514 OR12D3Q9UGF7 316 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 DUSP12Q9UNI6 340 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 MFHAS1Q9Y4C4 1052 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 PCDHA3Q9Y5H8 950 aa10.21□□□□□ -0.77
CLN8-202ENST00000517514 MUC22E2RYF6 1773 aaPredicted RBP10.21□□□□□ -0.78
CLN8-202ENST00000517514 PI4K2BG5E9Z4 385 aa10.2□□□□□ -0.78
CLN8-202ENST00000517514 PSTPIP1O43586 416 aa10.2□□□□□ -0.78
CLN8-202ENST00000517514 SPOPO43791 374 aa10.2□□□□□ -0.78
CLN8-202ENST00000517514 TBL1XO60907 577 aa10.2□□□□□ -0.78
CLN8-202ENST00000517514 CISD3P0C7P0 127 aa10.2□□□□□ -0.78
CLN8-202ENST00000517514 CHRM1P11229 460 aaPredicted RBP10.2□□□□□ -0.78
CLN8-202ENST00000517514 SRFP11831 508 aa10.2□□□□□ -0.78
CLN8-202ENST00000517514 TNNT1P13805 278 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms