RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 CHKAP35790 457 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 RPL34P49207 117 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PSEN1P49768 467 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ATXN3P54252 364 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 EIF4EBP2Q13542 120 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 EDRF1Q3B7T1 1238 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 WDR45BQ5MNZ6 344 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ADGRF1Q5T601 910 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 C9orf64Q5T6V5 341 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MBLAC2Q68D91 279 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SDE2Q6IQ49 451 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MSANTD2Q6P1R3 559 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 KANSL1Q7Z3B3 1105 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 GATAD2AQ86YP4 633 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 APCDD1Q8J025 514 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CFAP52Q8N1V2 620 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 AADATQ8N5Z0 425 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ADAM32Q8TC27 787 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 KCTD13Q8WZ19 329 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FOXJ1Q92949 421 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TTC17Q96AE7 1141 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TMA16Q96EY4 203 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SPATA32Q96LK8 384 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 NUP58Q9BVL2 599 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FAM124BQ9H5Z6 455 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 GGA2Q9UJY4 613 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 NAALADL1Q9UQQ1 740 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ANKRD6Q9Y2G4 727 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 GOLGA8CPA6NN73 597 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MEI4A8MW99 385 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 H0Y626 953 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CASC3O15234 703 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TBL1XO60907 577 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SIN3BO75182 1162 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TRIM16O95361 564 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ZNF883P0CG24 379 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CSKP41240 450 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 STK19P49842 368 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 GALCP54803 685 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PPP2CBP62714 309 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PPP2CAP67775 309 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CYP4F3Q08477 520 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DNAJC3Q13217 504 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 STARD3Q14849 445 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ISM2Q6H9L7 571 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DENND1BQ6P3S1 775 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 LCLAT1Q6UWP7 414 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SERPINA13PQ6UXR4 307 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PDZD3Q86UT5 571 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 WDTC1Q8N5D0 677 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DQX1Q8TE96 717 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SETD7Q8WTS6 366 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PRCCQ92733 491 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 VOPP1Q96AW1 172 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PLD4Q96BZ4 506 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC6A18Q96N87 628 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC2A11Q9BYW1 496 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DCLK3Q9C098 648 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 RSPH9Q9H1X1 276 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 NEUROG2Q9H2A3 272 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ANLNQ9NQW6 1124 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 KIAA1522Q9P206 1035 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 STIM2Q9P246 746 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 USP25Q9UHP3 1055 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 AJAP1Q9UKB5 411 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SARDHQ9UL12 918 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CA5BQ9Y2D0 317 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ZNF510Q9Y2H8 683 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 HBS1LQ9Y450 684 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FLNCQ14315 2725 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MYO18BQ8IUG5 2567 aa8.61□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PPP1R3GB7ZBB8 358 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MID1O15344 667 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PAPSS1O43252 624 aaPredicted RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TLX3O43711 291 aaPredicted RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ACSL4O60488 711 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SYNCRIPO60506 623 aaKnown RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 C1QL1O75973 258 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FSBPO95073 299 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SEMA4FO95754 770 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PRB1P04280 392 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MYL1P05976 194 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DLDP09622 509 aaKnown RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 KRT13P13646 458 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CD19P15391 556 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ITPKBP27987 946 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 OXTRP30559 389 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DPP6P42658 865 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MATKP42679 507 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 GPD2P43304 727 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 BST2Q10589 180 aaKnown RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 BNIP3Q12983 259 aa8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 EIF4HQ15056 248 aaKnown RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SMAD1Q15797 465 aaKnown RBP8.6□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms