RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 SNX16P57768 344 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 CREB5Q02930 508 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 CDK18Q07002 472 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 CCDC15Q0P6D6 951 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 NEXNQ0ZGT2 675 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 ALKBH1Q13686 389 aaKnown RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 RRP1BQ14684 758 aaKnown RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 TBCCQ15814 346 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 ZNF766Q5HY98 468 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 RABL3Q5HYI8 236 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 SLC30A6Q6NXT4 461 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 PTCHD4Q6ZW05 846 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 RRM2BQ7LG56 351 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 KRT74Q7RTS7 529 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 MAVSQ7Z434 540 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 TAGAPQ8N103 731 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 ENDOVQ8N8Q3 282 aaKnown RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 GPATCH11Q8N954 259 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 TOR1AIP2Q8NFQ8 470 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 RUFY2Q8WXA3 655 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 NCSTNQ92542 709 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 ELP4Q96EB1 424 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 FAM120BQ96EK7 910 aaKnown RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 RNFT2Q96EX2 444 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 TRMT61AQ96FX7 289 aaKnown RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 CALML4Q96GE6 196 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 FEM1CQ96JP0 617 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 PGBD1Q96JS3 809 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 FMNL2Q96PY5 1086 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 NR1H4Q96RI1 486 aaPredicted RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 EYA3Q99504 573 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 SLF1Q9BQI6 1058 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 HTATIP2Q9BUP3 242 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 CDCP1Q9H5V8 836 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 SEMA4BQ9NPR2 832 aaPredicted RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 TBCCD1Q9NVR7 557 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 AURKAIP1Q9NWT8 199 aaPredicted RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 HCFC1R1Q9NWW0 138 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 EHD3Q9NZN3 535 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 MPP6Q9NZW5 540 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 NFKBIL1Q9UBC1 381 aaPredicted RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 MGAT4CQ9UBM8 478 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 CFDP1Q9UEE9 299 aaPredicted RBP4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 PCDHB2Q9Y5E7 798 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 PIAS3Q9Y6X2 628 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 KDM3AQ9Y4C1 1321 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 RUSC2Q8N2Y8 1516 aa4.09□□□□□ -1.75
RNU6-27P-201ENST00000516146 FAM170AA1A519 330 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 NPIPB15A6NHN6 443 aaPredicted RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 FAM90A7PA6NKC0 464 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 FAM90A22PA8MWA6 464 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 FAM90A12PA8MX19 464 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 FAM90A23PA8MXZ1 464 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 TTC34A8MYJ7 566 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 TEX22C9J3V5 150 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 VILLO15195 856 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CA12O43570 354 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 DKC1O60832 514 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 SEC14L2O76054 403 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 DNTTP04053 509 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 RPN1P04843 607 aaKnown RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 IL6RP08887 468 aaPredicted RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CSH1P0DML2 217 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CSH2P0DML3 217 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CYP4B1P13584 511 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 COX7A2P14406 83 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 DUSP1P28562 367 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 BMPR1AP36894 532 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CTCFP49711 727 aaPredicted RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 HNRNPMP52272 730 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 FOXL2P58012 376 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 RPL7AP62424 266 aaKnown RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 GOLGA8DPQ0D2H9 430 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 BEAN1Q3B7T3 259 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 ALDH1L2Q3SY69 923 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 ZNF648Q5T619 568 aaPredicted RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CYP20A1Q6UW02 462 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 DPY19L3Q6ZPD9 716 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 IKBIPQ70UQ0 350 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 TTC39CQ8N584 583 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 SRBD1Q8N5C6 995 aaKnown RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CPEB3Q8NE35 698 aaKnown RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 MYCBPAPQ8TBZ2 947 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 SSH3Q8TE77 659 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CLEC4CQ8WTT0 213 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 SCFD2Q8WU76 684 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 LPIN2Q92539 896 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 KCNJ9Q92806 393 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 CTHRC1Q96CG8 243 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 PTCD3Q96EY7 689 aaKnown RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 TTC14Q96N46 770 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 ASB2Q96Q27 587 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 PRR25Q96S07 402 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 MPHOSPH8Q99549 860 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 BAG1Q99933 345 aaPredicted RBP4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 USP44Q9H0E7 712 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 SAP30LQ9HAJ7 183 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 ERVK-5Q9HDB9 667 aa4.08□□□□□ -1.76
RNU6-27P-201ENST00000516146 KLC4Q9NSK0 619 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms