RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 SEMA3CQ99985 751 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SOSTQ9BQB4 213 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C20orf144Q9BQM9 153 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HEPHQ9BQS7 1158 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NTPCRQ9BSD7 190 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RPP25Q9BUL9 199 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TIMM21Q9BVV7 248 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 JAM3Q9BX67 310 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PLA2G12BQ9BX93 195 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 USP26Q9BXU7 913 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IFIH1Q9BYX4 1025 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC25A39Q9BZJ4 359 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AMBRA1Q9C0C7 1298 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC39A8Q9C0K1 460 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AGPAT4-IT1Q9H0P7 198 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MMP28Q9H239 520 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DNAJC5Q9H3Z4 198 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BICC1Q9H694 974 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF395Q9H8N7 513 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AGO3Q9H9G7 860 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ERVMER34-1Q9H9K5 563 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 JMJD4Q9H9V9 463 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ELL3Q9HB65 397 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPACA1Q9HBV2 294 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDH9Q9HC56 1237 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MSL2Q9HCI7 577 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ATP13A1Q9HD20 1204 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CCNB1IP1Q9NPC3 277 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADAP2Q9NPF8 381 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SEC31BQ9NQW1 1179 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DDX21Q9NR30 783 aaKnown RBP eCLIP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CATSPERZQ9NTU4 200 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZBTB40Q9NUA8 1239 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 POT1Q9NUX5 634 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DDX18Q9NVP1 670 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNK4Q9NYG8 393 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SH3BP4Q9P0V3 963 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KIAA1456Q9P272 454 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 USP36Q9P275 1121 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CFAP97Q9P2B7 532 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM198AQ9UFP1 575 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IL20RAQ9UHF4 553 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GLS2Q9UI32 602 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GPR160Q9UJ42 338 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FBXO3Q9UK99 471 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACSL6Q9UKU0 697 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HDAC9Q9UKV0 1011 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ELF5Q9UKW6 265 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PNMA3Q9UL41 463 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SORCS3Q9UPU3 1222 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CA5BQ9Y2D0 317 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GIT1Q9Y2X7 761 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RTCBQ9Y3I0 505 aaKnown RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SIT1Q9Y3P8 196 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 USP15Q9Y4E8 981 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDHA9Q9Y5H5 950 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FHOD1Q9Y613 1164 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SOX21Q9Y651 276 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC12A7Q9Y666 1083 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC30A1Q9Y6M5 507 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 U3KQK5 164 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPACA6W5XKT8 324 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DOCK11Q5JSL3 2073 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PFASO15067 1338 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TRIP11Q15643 1979 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SIP14410 1827 aa-0.68□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RFX7Q2KHR2 1363 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RPAP1Q9BWH6 1393 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SCN3AQ9NY46 2000 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NYNRINQ9P2P1 1898 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KIAA1210Q9ULL0 1709 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LAMC3Q9Y6N6 1575 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LCTP09848 1927 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CFAP65Q6ZU64 1925 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ANAPC1Q9H1A4 1944 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RGS12O14924 1447 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CYP2D7A0A087X1C5 515 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LOC102724159A0A0B4J2E5 919 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 A0A0D9SG52 128 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 hCG_38984A0A1B0GV85 526 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PALM3A6NDB9 673 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C9orf118A6NHY6 69 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRSS29PA6NIE9 313 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM196BA6NMK8 535 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF729A6NN14 1252 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CAPN14A8MX76 684 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TMEM229AB2RXF0 380 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C2CD4DB7Z1M9 353 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 E5RJQ4 531 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 F5H0A9 414 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM227AF5H4B4 570 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 F6X3S4 739 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MYO1FO00160 1098 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SMAPO00193 183 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PDXKO00764 312 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TM4SF5O14894 197 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IRF6O14896 467 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PLD2O14939 933 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms