RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 POF1BQ8WVV4 589 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PSMG2Q969U7 264 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TBC1D31Q96DN5 1066 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 BTN2A3PQ96KV6 586 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C1orf74Q96LT6 269 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SAMD11Q96NU1 681 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 OLFM3Q96PB7 478 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 QKIQ96PU8 341 aaKnown RBP eCLIP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TSPYL1Q9H0U9 437 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CATSPERBQ9H7T0 1116 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C10orf88Q9H8K7 445 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TLR9Q9NR96 1032 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DTLQ9NZJ0 730 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PAK5Q9P286 719 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TPX2Q9ULW0 747 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HPCAL4Q9UM19 191 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MFHAS1Q9Y4C4 1052 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ASB3Q9Y575 518 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MYO18AQ92614 2054 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CLUHO75153 1309 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HIDE1A8MVS5 230 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GRXCR1A8MXD5 290 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NCAM2O15394 837 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 STK10O94804 968 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CSPG5O95196 566 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GLUD1P00367 558 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C8AP07357 584 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MYOGP15173 224 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MX2P20592 715 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MAGEA10P43363 369 aaPredicted RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MLLT6P55198 1093 aaPredicted RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 COG7P83436 770 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DHX9Q08211 1270 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GPS2Q13227 327 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SLMAPQ14BN4 828 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MORF4L2Q15014 288 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SHHQ15465 462 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PABPC1LQ4VXU2 614 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CFAP58Q5T655 872 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PIK3R6Q5UE93 754 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MANEALQ5VSG8 457 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ALS2CLQ60I27 953 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NUGGCQ68CJ6 796 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HEATR6Q6AI08 1181 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HIBCHQ6NVY1 386 aaPredicted RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RHBDF2Q6PJF5 856 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LRRC31Q6UY01 552 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C4orf22Q6V702 233 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 B4GALNT4Q76KP1 1039 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TMC3Q7Z5M5 1100 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ELMOD1Q8N336 334 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LZTR1Q8N653 840 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TSEN2Q8NCE0 465 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KREMEN2Q8NCW0 462 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MICAL1Q8TDZ2 1067 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RTP4Q96DX8 246 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ABHD8Q96I13 439 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FOXP3Q9BZS1 431 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 BRD8Q9H0E9 1235 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 USP29Q9HBJ7 922 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DONSONQ9NYP3 566 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 XPO7Q9UIA9 1087 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 VANGL2Q9ULK5 521 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SHOC2Q9UQ13 582 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HS3ST4Q9Y661 456 aa7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HELZP42694 1942 aaKnown RBP7.87□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ATG2AQ2TAZ0 1938 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NYNRINQ9P2P1 1898 aaKnown RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GOLGA6BA6NDN3 693 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C5orf60A6NFR6 353 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CCDC85CA6NKD9 419 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 E9PAM4 449 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SMAPO00193 183 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GRM6O15303 877 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TP73O15350 636 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 COCHO43405 550 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PPFIA2O75334 1257 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GCATO75600 419 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 F11P03951 625 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CA3P07451 260 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DNAJB1P25685 340 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HOXC13P31276 330 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HSD17B3P37058 310 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HARS2P49590 506 aaKnown RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PMS2P54278 862 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GALNT2Q10471 571 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 AP1B1Q10567 949 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PRKD1Q15139 912 aaPredicted RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MS4A13Q5J8X5 152 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SPDYCQ5MJ68 293 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PPM1LQ5SGD2 360 aa7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RNASEH2BQ5TBB1 312 aaKnown RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FAM109BQ6ICB4 259 aaPredicted RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PDE12Q6L8Q7 609 aaKnown RBP7.86□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ARHGEF18Q6ZSZ5 1173 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms