RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 FAM47DPA6NHR8 397 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 TULP2O00295 520 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 XPO1O14980 1071 aaKnown RBP16.4■□□□□ 0.22
LMNA-223ENST00000515459 VILLO15195 856 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 F13A1P00488 732 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 ADIGQ0VDE8 80 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 ADAM9Q13443 819 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 GOLGA7BQ2TAP0 167 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 MPP7Q5T2T1 576 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 C6orf118Q5T5N4 469 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 GATAD2AQ86YP4 633 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 ZNF557Q8N988 423 aaPredicted RBP16.4■□□□□ 0.22
LMNA-223ENST00000515459 PIP4K2CQ8TBX8 421 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 GANCQ8TET4 914 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 SEMA4DQ92854 862 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 CCDC47Q96A33 483 aaKnown RBP16.4■□□□□ 0.22
LMNA-223ENST00000515459 NXPE2Q96DL1 559 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 RSPH9Q9H1X1 276 aaPredicted RBP16.4■□□□□ 0.22
LMNA-223ENST00000515459 ABCC13Q9NSE7 274 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 RAB20Q9NX57 234 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
LMNA-223ENST00000515459 A0A1W2PPC4 97 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 YJEFN3A6XGL0 299 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 E7ENQ6 273 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 ENC1O14682 589 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 MSI1O43347 362 aaKnown RBP16.39■□□□□ 0.21
LMNA-223ENST00000515459 CDK4P11802 303 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 JUPP14923 745 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 CD70P32970 193 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 MXI1P50539 228 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 SGSHP51688 502 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 ST8SIA6P61647 398 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 BST2Q10589 180 aaKnown RBP16.39■□□□□ 0.21
LMNA-223ENST00000515459 SFSWAPQ12872 951 aaKnown RBP16.39■□□□□ 0.21
LMNA-223ENST00000515459 WFDC5Q8TCV5 224 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 SLC6A18Q96N87 628 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 ELF4Q99607 663 aaPredicted RBP16.39■□□□□ 0.21
LMNA-223ENST00000515459 IRX2Q9BZI1 471 aaPredicted RBP16.39■□□□□ 0.21
LMNA-223ENST00000515459 PABPC3Q9H361 631 aaKnown RBP16.39■□□□□ 0.21
LMNA-223ENST00000515459 FBXL12Q9NXK8 326 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 RCOR1Q9UKL0 485 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
LMNA-223ENST00000515459 A0A1B0GVL5 298 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 TBL1XO60907 577 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 RNASEH1O60930 286 aaKnown RBP16.38■□□□□ 0.21
LMNA-223ENST00000515459 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 LDOC1O95751 146 aaPredicted RBP16.38■□□□□ 0.21
LMNA-223ENST00000515459 ITGAVP06756 1048 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 C1SP09871 688 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 PFKFB1P16118 471 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 ABCB4P21439 1286 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 GALCP54803 685 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 MCCD1P59942 119 aaPredicted RBP16.38■□□□□ 0.21
LMNA-223ENST00000515459 C19orf57Q0VDD7 668 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 SGO2Q562F6 1265 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 PRAMEF14Q5SWL7 426 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 PIK3R6Q5UE93 754 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 SIX6OS1Q8N1H7 587 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 GUF1Q8N442 669 aaKnown RBP16.38■□□□□ 0.21
LMNA-223ENST00000515459 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 TATDN2Q93075 761 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 CNDP2Q96KP4 475 aaKnown RBP16.38■□□□□ 0.21
LMNA-223ENST00000515459 MTG2Q9H4K7 406 aa16.38■□□□□ 0.21
LMNA-223ENST00000515459 KNTC1P50748 2209 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 ASXL3Q9C0F0 2248 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 LRRC72A6NJI9 287 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 TK2O00142 265 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 IRAK2O43187 625 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 STX10O60499 249 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 SIN3BO75182 1162 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 RFPL3O75679 317 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 ITPKBP27987 946 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 CD38P28907 300 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 SLC11A2P49281 568 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 DNM1Q05193 864 aaKnown RBP16.37■□□□□ 0.21
LMNA-223ENST00000515459 HNRNPA1L2Q32P51 320 aaKnown RBP16.37■□□□□ 0.21
LMNA-223ENST00000515459 NUGGCQ68CJ6 796 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 RFWD3Q6PCD5 774 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 NCEH1Q6PIU2 408 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 LRRC69Q6ZNQ3 347 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 MFN1Q8IWA4 741 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 UNC45BQ8IWX7 931 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 SCML4Q8N228 414 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 KCTD13Q8WZ19 329 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 MYO19Q96H55 970 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 OMDQ99983 421 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 EBF2Q9HAK2 575 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 CNGB3Q9NQW8 809 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 AASDHPPTQ9NRN7 309 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 SERGEFQ9UGK8 458 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 MYLKQ15746 1914 aa16.37■□□□□ 0.21
LMNA-223ENST00000515459 NYNRINQ9P2P1 1898 aaKnown RBP16.36■□□□□ 0.21
LMNA-223ENST00000515459 A0A1W2PP55 124 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 CBX4O00257 560 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 MID1O15344 667 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 YKT6O15498 198 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 IGLV3-27P01718 113 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 ASLP04424 464 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 WNT1P04628 370 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms