RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 PTPRNQ16849 979 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 CCDC183Q5T5S1 534 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 MBLAC2Q68D91 279 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 ZDHHC17Q8IUH5 632 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 MFN1Q8IWA4 741 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 TMEM35BQ8NCS4 154 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 ZNF397Q8NF99 534 aaPredicted RBP23.88■■□□□ 1.41
CLDND1-230ENST00000514537 CYB5D2Q8WUJ1 264 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 PDCL3Q9H2J4 239 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 TMEM245Q9H330 911 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 SYNCQ9H7C4 482 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 FAM204AQ9H8W3 233 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 THADAQ6YHU6 1953 aa23.88■■□□□ 1.41
CLDND1-230ENST00000514537 KCNU1A8MYU2 1149 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 KHNYNO15037 678 aaKnown RBP23.87■■□□□ 1.41
CLDND1-230ENST00000514537 EPHX1P07099 455 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 TPM2P07951 284 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 TACR2P21452 398 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 STPG1Q5TH74 334 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 LYSMD4Q5XG99 296 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 RAP1GAP2Q684P5 730 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 KIAA1324Q6UXG2 1013 aaKnown RBP23.87■■□□□ 1.41
CLDND1-230ENST00000514537 ARMCX6Q7L4S7 300 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 SLC26A9Q7LBE3 791 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 TMPRSS6Q8IU80 811 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 SYT12Q8IV01 421 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 ATP6V0D2Q8N8Y2 350 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 CD93Q9NPY3 652 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 TMEM74BQ9NUR3 256 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 DDIT4Q9NX09 232 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 SLC12A6Q9UHW9 1150 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 SPTBN2O15020 2390 aa23.87■■□□□ 1.41
CLDND1-230ENST00000514537 MED19A0JLT2 244 aaPredicted RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 PATE3B3GLJ2 98 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 ATP5BP06576 529 aaKnown RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 DLDP09622 509 aaKnown RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 SLC2A3P11169 496 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 HLA-EP13747 358 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 DPP6P42658 865 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 GABRB2P47870 512 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 KLK7P49862 253 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 COPAP53621 1224 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 MYL5Q02045 173 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 LMAN2Q12907 356 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 FNDC3BQ53EP0 1204 aaKnown RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 FKBP15Q5T1M5 1219 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 TAF3Q5VWG9 929 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 PEAR1Q5VY43 1037 aaPredicted RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 NOP9Q86U38 636 aaKnown RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 LGI2Q8N0V4 545 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 CFAP52Q8N1V2 620 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 TTC17Q96AE7 1141 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 ITM2CQ9NQX7 267 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 USP36Q9P275 1121 aaKnown RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 LIMA1Q9UHB6 759 aaKnown RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 EVLQ9UI08 416 aaPredicted RBP23.86■■□□□ 1.41
CLDND1-230ENST00000514537 PILRBQ9UKJ0 227 aa23.86■■□□□ 1.41
CLDND1-230ENST00000514537 NCOR2Q9Y618 2525 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 PLXND1Q9Y4D7 1925 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 TM4SF5O14894 197 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 DAB1O75553 588 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 LUC7L3O95232 432 aaKnown RBP23.85■■□□□ 1.41
CLDND1-230ENST00000514537 POLR2EP19388 210 aaKnown RBP23.85■■□□□ 1.41
CLDND1-230ENST00000514537 ITPKAP23677 461 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 CCR1P32246 355 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 NOS2P35228 1153 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 COPB1P53618 953 aaKnown RBP23.85■■□□□ 1.41
CLDND1-230ENST00000514537 ZNF33AQ06730 810 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 CAMK2GQ13555 558 aaPredicted RBP23.85■■□□□ 1.41
CLDND1-230ENST00000514537 CHSY1Q86X52 802 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 CARNMT1Q8N4J0 409 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 DEFB119Q8N690 84 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 C18orf8Q96DM3 657 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 SIPA1Q96FS4 1042 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 PRMT1Q99873 361 aaKnown RBP23.85■■□□□ 1.41
CLDND1-230ENST00000514537 EDEM2Q9BV94 578 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 INTS6Q9UL03 887 aaKnown RBP23.85■■□□□ 1.41
CLDND1-230ENST00000514537 SIK3Q9Y2K2 1263 aa23.85■■□□□ 1.41
CLDND1-230ENST00000514537 LNP1A1A4G5 178 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 LRRC10BA6NIK2 292 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 LSM8O95777 96 aaKnown RBP23.84■■□□□ 1.41
CLDND1-230ENST00000514537 C7P10643 843 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 ABCB4P21439 1286 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 CD6P30203 668 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 MATKP42679 507 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 IRX4P78413 519 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 CDH18Q13634 790 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 NCAPHQ15003 741 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 FSCBQ5H9T9 825 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 IL31Q6EBC2 164 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 ERICH1Q86X53 443 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 CCDC117Q8IWD4 279 aaPredicted RBP23.84■■□□□ 1.41
CLDND1-230ENST00000514537 OR2T3Q8NH03 318 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 EPS8L1Q8TE68 723 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 PRCCQ92733 491 aaPredicted RBP23.84■■□□□ 1.41
CLDND1-230ENST00000514537 ZNF419Q96HQ0 510 aaPredicted RBP23.84■■□□□ 1.41
CLDND1-230ENST00000514537 FAM207AQ9NSI2 230 aaPredicted RBP23.84■■□□□ 1.41
CLDND1-230ENST00000514537 DAAM1Q9Y4D1 1078 aa23.84■■□□□ 1.41
CLDND1-230ENST00000514537 SYNJ2BP-COX16A0A087WUM0 186 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 F5H5T6 163 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms