RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ATG13O75143 517 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 TIE1P35590 1138 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 PTPN9P43378 593 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 CCR3P51677 355 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 PTPN5P54829 565 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 SATB1Q01826 763 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 AUHQ13825 339 aaKnown RBP14.44□□□□□ -0.1
USP46-209ENST00000514536 CCDC122Q5T0U0 273 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 MPP7Q5T2T1 576 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 PLEKHA7Q6IQ23 1121 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 ALKBH5Q6P6C2 394 aaKnown RBP14.44□□□□□ -0.1
USP46-209ENST00000514536 TSSK4Q6SA08 328 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 HJURPQ8NCD3 748 aaPredicted RBP14.44□□□□□ -0.1
USP46-209ENST00000514536 ZNF653Q96CK0 615 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 PRMT1Q99873 361 aaKnown RBP14.44□□□□□ -0.1
USP46-209ENST00000514536 SLC2A11Q9BYW1 496 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 TMEM51Q9NW97 253 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 MYO1AQ9UBC5 1043 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 SLC27A6Q9Y2P4 619 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 PAXBP1Q9Y5B6 917 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 HS3ST4Q9Y661 456 aa14.44□□□□□ -0.1
USP46-209ENST00000514536 CHURC1-FNTBB4DL54 471 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 PRRT4C9JH25 899 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 I6L893 689 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 GGCXP38435 758 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 KIR2DL1P43626 348 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 ZNF143P52747 638 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 MRPS21P82921 87 aaKnown RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 MTA1Q13330 715 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 FBXL22Q6P050 247 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 C14orf80Q86SX3 495 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 CNGA4Q8IV77 575 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 CCDC33Q8N5R6 958 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 FAM172AQ8WUF8 416 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 CENPIQ92674 756 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 TRIM11Q96F44 468 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 CHP1Q99653 195 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 ZDHHC4Q9NPG8 344 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 SNX10Q9Y5X0 201 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 MIA3Q5JRA6 1907 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 TYW5A2RUC4 315 aaKnown RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 CCP110O43303 1012 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 SP9P0CG40 484 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 MYBL1P10243 752 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 HOXC13P31276 330 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 OGDHQ02218 1023 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 GFPT1Q06210 699 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 GEN1Q17RS7 908 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 STRADAQ7RTN6 431 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 CARNMT1Q8N4J0 409 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 WFDC5Q8TCV5 224 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 IGSF8Q969P0 613 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 DEF6Q9H4E7 631 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 PRMT8Q9NR22 394 aaPredicted RBP14.43□□□□□ -0.1
USP46-209ENST00000514536 FBXO4Q9UKT5 387 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 HCN2Q9UL51 889 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 VANGL2Q9ULK5 521 aa14.43□□□□□ -0.1
USP46-209ENST00000514536 SSU72P8A0A1W2PR75 194 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 TMEM191CA6NGB0 347 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 AKR1B10O60218 316 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 KLF8O95600 359 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 CHRM1P11229 460 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 HLA-FP30511 346 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 ADRA1BP35368 520 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 HDAC4P56524 1084 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 ASTE1Q2TB18 679 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 RABGAP1LQ5R372 815 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 RNF43Q68DV7 783 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 ANKS1BQ7Z6G8 1248 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 MFN1Q8IWA4 741 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 CCDC117Q8IWD4 279 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 ALLCQ8N6M5 410 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 ZNF513Q8N8E2 541 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 TC2NQ8N9U0 490 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 IL17RCQ8NAC3 791 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 TXNDC5Q8NBS9 432 aaKnown RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 FIBINQ8TAL6 211 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 ATOH1Q92858 354 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 C1orf74Q96LT6 269 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 CCDC42Q96M95 316 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 RPRD1AQ96P16 312 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 HAPLN3Q96S86 360 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 CNPY3Q9BT09 278 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 TRIM7Q9C029 511 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 THAP2Q9H0W7 228 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 NHEJ1Q9H9Q4 299 aaPredicted RBP14.42□□□□□ -0.1
USP46-209ENST00000514536 ABCB8Q9NUT2 735 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 SLC8A2Q9UPR5 921 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 STARD13Q9Y3M8 1113 aa14.42□□□□□ -0.1
USP46-209ENST00000514536 H0Y626 953 aa14.41□□□□□ -0.1
USP46-209ENST00000514536 LUC7L3O95232 432 aaKnown RBP14.41□□□□□ -0.1
USP46-209ENST00000514536 PABPC1P11940 636 aaKnown RBP14.41□□□□□ -0.1
USP46-209ENST00000514536 CD70P32970 193 aa14.41□□□□□ -0.1
USP46-209ENST00000514536 GALCP54803 685 aa14.41□□□□□ -0.1
USP46-209ENST00000514536 DMC1Q14565 340 aa14.41□□□□□ -0.1
USP46-209ENST00000514536 SLC18A3Q16572 532 aa14.41□□□□□ -0.1
USP46-209ENST00000514536 EGFLAMQ63HQ2 1017 aa14.41□□□□□ -0.1
USP46-209ENST00000514536 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms