RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 NDUFS2O75306 463 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 MOCS2O96007 188 aaPredicted RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 APOEP02649 317 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 SERPINF2P08697 491 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 RPS24P62847 133 aaKnown RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 PTK2Q05397 1052 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 KCNJ12Q14500 433 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 TAF5Q15542 800 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 DUOXA1Q1HG43 343 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 HSP90AA4PQ58FG1 418 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 DAB2IPQ5VWQ8 1189 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 OLFML1Q6UWY5 402 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 RBM43Q6ZSC3 357 aaKnown RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 FAM183BPQ6ZVS7 135 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 SLC47A2Q86VL8 602 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 OR2T3Q8NH03 318 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 PRCCQ92733 491 aaPredicted RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 TTC17Q96AE7 1141 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 TOE1Q96GM8 510 aaKnown RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 MYO19Q96H55 970 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 PPP1R13BQ96KQ4 1090 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 FBRSQ9HAH7 460 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 SLC6A14Q9UN76 642 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 PLA2G4CQ9UP65 541 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 NFE2L3Q9Y4A8 694 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 FHOD1Q9Y613 1164 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 THADAQ6YHU6 1953 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 DAB1O75553 588 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 LUC7L3O95232 432 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 ERBB2P04626 1255 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CFIP05156 583 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 ATP5BP06576 529 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 ACADMP11310 421 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 POLR2EP19388 210 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CSRP1P21291 193 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 TACR2P21452 398 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 KCNA4P22459 653 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 PMLP29590 882 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 OXTRP30559 389 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CDH5P33151 784 aaPredicted RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 MAPK8P45983 427 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 KCNMA1Q12791 1236 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CDH18Q13634 790 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 PTPN20Q4JDL3 420 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 DCAF6Q58WW2 860 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 TCP11X2Q5H9J9 407 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 EFHC1Q5JVL4 640 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 WDR45BQ5MNZ6 344 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 KLHDC7AQ5VTJ3 777 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 RAP1GAP2Q684P5 730 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 PSAPL1Q6NUJ1 521 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CHSY1Q86X52 802 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CACUL1Q86Y37 369 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 LGI2Q8N0V4 545 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 DEFB106AQ8N104 65 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CARNMT1Q8N4J0 409 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 ZNF366Q8N895 744 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 ZNF397Q8NF99 534 aaPredicted RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 CADM4Q8NFZ8 388 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 NOX5Q96PH1 765 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 PRMT1Q99873 361 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 NAA15Q9BXJ9 866 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 FAM204AQ9H8W3 233 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 PRSS16Q9NQE7 514 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 FSCN3Q9NQT6 498 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 SAMSN1Q9NSI8 373 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 STIM2Q9P246 746 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 SUSD2Q9UGT4 822 aa10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 INTS6Q9UL03 887 aaKnown RBP10.83□□□□□ -0.68
HMGXB3-205ENST00000514469 MEI4A8MW99 385 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 KCNU1A8MYU2 1149 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 ASLP04424 464 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 SLC2A3P11169 496 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 CYP11B1P15538 503 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 CCR1P32246 355 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 KRT9P35527 623 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 CSKP41240 450 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 NOVA1P51513 510 aaKnown RBP10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 BPIFB4P59827 614 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 CDK17Q00537 523 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 SLC6A3Q01959 620 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 GFPT1Q06210 699 aaPredicted RBP10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 RAPGEF1Q13905 1077 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 FSCBQ5H9T9 825 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 PITRM1Q5JRX3 1037 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 SYCP2LQ5T4T6 812 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 SH3PXD2AQ5TCZ1 1133 aa10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 TTC39BQ5VTQ0 682 aaPredicted RBP10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 OTUD1Q5VV17 481 aaPredicted RBP10.82□□□□□ -0.68
HMGXB3-205ENST00000514469 CDKAL1Q5VV42 579 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms