RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 GOLGA8SH3BPF8 625 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 PDE2AO00408 941 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 HOXC11O43248 304 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 MSI1O43347 362 aaKnown RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 ACSL4O60488 711 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCL28-204ENST00000514421 F9P00740 461 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 IGLV3-27P01718 113 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 CYBBP04839 570 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 CALB1P05937 261 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 SLC2A3P11169 496 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 COL9A1P20849 921 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 OPRD1P41143 372 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 EIF2DP41214 584 aaKnown RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 MATKP42679 507 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 SLC11A2P49281 568 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 CENPCQ03188 943 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 EIF4EBP2Q13542 120 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 CCINQ13939 588 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 BRD3Q15059 726 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 GAB4Q2WGN9 574 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 MPPE1Q53F39 396 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 C2CD6Q53TS8 623 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 ZC3H12AQ5D1E8 599 aaKnown RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 ADGRF1Q5T601 910 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 FAM102AQ5T9C2 384 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 FSTL4Q6MZW2 842 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 C11orf63Q6NUN7 778 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 MMS22LQ6ZRQ5 1243 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 TPGS1Q6ZTW0 290 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 SYCE1Q8N0S2 351 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 CPXM2Q8N436 756 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 NAT16Q8N8M0 369 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 ADAM32Q8TC27 787 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 RNF34Q969K3 372 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 NT5C3BQ969T7 300 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 TMA16Q96EY4 203 aaKnown RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 HES6Q96HZ4 224 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 PIWIL1Q96J94 861 aaKnown RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 VCPIP1Q96JH7 1222 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 FCRL2Q96LA5 508 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 IER2Q9BTL4 223 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 BBS2Q9BXC9 721 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 CHRDQ9H2X0 955 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 DEC1Q9P2X7 70 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCL28-204ENST00000514421 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 TTC7AQ9ULT0 858 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 STAP1Q9ULZ2 295 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 HCN4Q9Y3Q4 1203 aa8.63□□□□□ -1.03
CCL28-204ENST00000514421 V9GYY5 206 aaPredicted RBP8.63□□□□□ -1.03
CCL28-204ENST00000514421 CACNA1IQ9P0X4 2223 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 M0QYT0 321 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 IRAK2O43187 625 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 BUB1O43683 1085 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 SRGAP2O75044 1071 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 ATG13O75143 517 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 TULP3O75386 442 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 DAB1O75553 588 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 EGFP01133 1207 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 IGLV3-25P01717 112 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 APOEP02649 317 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 APODP05090 189 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 CYP1A2P05177 515 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 KRT3P12035 628 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 TYRP14679 529 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 CCR1P32246 355 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 GRIA2P42262 883 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 TNFRSF4P43489 277 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 PTP4A2Q12974 167 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 MTA1Q13330 715 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 SLC25A52Q3SY17 297 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 PHLDB2Q86SQ0 1253 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 TAC4Q86UU9 113 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 NT5DC3Q86UY8 548 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 C1orf210Q8IVY1 113 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 ETFBKMTQ8IXQ9 262 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 FAM217AQ8IXS0 508 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 MCOLN2Q8IZK6 566 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 RASGEF1CQ8N431 466 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 SPEM1Q8N4L4 309 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 ATP6V0D2Q8N8Y2 350 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 NOA1Q8NC60 698 aaKnown RBP8.62□□□□□ -1.03
CCL28-204ENST00000514421 SLC35G2Q8TBE7 412 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 DDI1Q8WTU0 396 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 COG1Q8WTW3 980 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 CTNNBL1Q8WYA6 563 aaPredicted RBP8.62□□□□□ -1.03
CCL28-204ENST00000514421 PBKQ96KB5 322 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 NPY6RQ99463 290 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 C11orf70Q9BRQ4 267 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 PARD6BQ9BYG5 372 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 FAM204AQ9H8W3 233 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 ARHGEF4Q9NR80 690 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 RBM12Q9NTZ6 932 aaKnown RBP8.62□□□□□ -1.03
CCL28-204ENST00000514421 ARGLU1Q9NWB6 273 aaPredicted RBP8.62□□□□□ -1.03
CCL28-204ENST00000514421 SPATA6Q9NWH7 488 aaPredicted RBP8.62□□□□□ -1.03
CCL28-204ENST00000514421 ZNF446Q9NWS9 450 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms