RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	CTIF	O43310	598 aa	Known RBP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ZBED4	O75132	1171 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	GUCY1B2	O75343	617 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	WDR47	O94967	919 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TJP3	O95049	919 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	RTN3	O95197	1032 aa	Predicted RBP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	HNRNPA1	P09651	372 aa	Known RBP eCLIP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	NPS	P0C0P6	89 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	MMP8	P22894	467 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	RPS6KB1	P23443	525 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CHM	P24386	653 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	EEFSEC	P57772	596 aa	Known RBP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	SRSF4	Q08170	494 aa	Known RBP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	MTAP	Q13126	283 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DCTN1	Q14203	1278 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	KCNJ12	Q14500	433 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	FAM90A2P	Q658T7	463 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DENND2C	Q68D51	928 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	LRRC8D	Q7L1W4	858 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	SYT13	Q7L8C5	426 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	RASAL3	Q86YV0	1011 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ARMC8	Q8IUR7	673 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PDILT	Q8N807	584 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	FSIP1	Q8NA03	581 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	SOCS4	Q8WXH5	440 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ATG4A	Q8WYN0	398 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ZUFSP	Q96AP4	578 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	FAR2	Q96K12	515 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	EIF3C	Q99613	913 aa	Known RBP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	NRIP3	Q9NQ35	241 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	IL17RB	Q9NRM6	502 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	NSMCE4A	Q9NXX6	385 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CLIC5	Q9NZA1	410 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	AASS	Q9UDR5	926 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	SERTAD3	Q9UJW9	196 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ARHGAP26	Q9UNA1	814 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DRG1	Q9Y295	367 aa	Known RBP	3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TTLL3	Q9Y4R7	772 aa		3.81	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	LOC105369274	A0A096LPK9	316 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	LOC102723532	A0A0G2JNH3	316 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DYTN	A2CJ06	578 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PGPEP1L	A6NFU8	196 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267		H7C1Q1	480 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PSMD9	O00233	223 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	EXOC5	O00471	708 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	HNRNPC	P07910	306 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TMEM225B	P0DP42	221 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ADORA2A	P29274	412 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	HNRNPM	P52272	730 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	EIF4A1	P60842	406 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	RBM6	P78332	1123 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TBL3	Q12788	808 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	AASDH	Q4L235	1098 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TMEM196	Q5HYL7	178 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	GPATCH4	Q5T3I0	446 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DEPDC1	Q5TB30	811 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CCDC30	Q5VVM6	783 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ITPRIPL1	Q6GPH6	555 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CCDC144NL	Q6NUI1	221 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DENND1B	Q6P3S1	775 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PARS2	Q7L3T8	475 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	OR4N4	Q8N0Y3	316 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TDRD7	Q8NHU6	1098 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	UCMA	Q8WVF2	138 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	REXO5	Q96IC2	774 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	VPS50	Q96JG6	964 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PIGS	Q96S52	555 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	NPAS1	Q99742	590 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CCDC134	Q9H6E4	229 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	FBXO28	Q9NVF7	368 aa		3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	BCCIP	Q9P287	314 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ORC3	Q9UBD5	711 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	COL11A2	P13942	1736 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ZNF804B	A4D1E1	1349 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	STX16-NPEPL1	H3BU86	382 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	STX16	O14662	325 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	NKX2-8	O15522	239 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	FIBP	O43427	364 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	USO1	O60763	962 aa	Known RBP	3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	RHO	P08100	348 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CELA2A	P08217	269 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CYP3A4	P08684	503 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CSF1	P09603	554 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PSMA4	P25789	261 aa	Known RBP	3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PGM1	P36871	562 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PBX1	P40424	430 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PNPLA4	P41247	253 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	GPD2	P43304	727 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	PROK1	P58294	105 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	TLE3	Q04726	772 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	SEMA3B	Q13214	749 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CBFB	Q13951	182 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	GPR68	Q15743	365 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	SRSF7	Q16629	238 aa	Known RBP eCLIP	3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	AAK1	Q2M2I8	961 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	P3H1	Q32P28	736 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CERKL	Q49MI3	558 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	ZNF484	Q5JVG2	852 aa		3.79	□□□□□ -1.8
CALCOCO2-223	ENST00000514267	CBWD5	Q5RIA9	395 aa		3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms