RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SUN2Q9UH99 717 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 STOML2Q9UJZ1 356 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 FZD4Q9ULV1 537 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 PCDHB1Q9Y5F3 818 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 TMEM131Q92545 1883 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 SLC28A2O43868 658 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 MT-CO3P00414 261 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 HARS2P49590 506 aaKnown RBP11.41□□□□□ -0.58
DDX41-216ENST00000513562 E2F1Q01094 437 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 SFSWAPQ12872 951 aaKnown RBP11.41□□□□□ -0.58
DDX41-216ENST00000513562 CST6Q15828 149 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 E2F4Q16254 413 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 SPOPLQ6IQ16 392 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 KDM7AQ6ZMT4 941 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
DDX41-216ENST00000513562 LURAP1LQ8IV03 231 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 SERAC1Q96JX3 654 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 NEUROG2Q9H2A3 272 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 MTG2Q9H4K7 406 aa11.41□□□□□ -0.58
DDX41-216ENST00000513562 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
DDX41-216ENST00000513562 TPX2Q9ULW0 747 aaKnown RBP11.41□□□□□ -0.58
DDX41-216ENST00000513562 CABIN1Q9Y6J0 2220 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 A0A1W2PP55 124 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 MID1O15344 667 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 SIN3BO75182 1162 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 RNASEH2AO75792 299 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 KIF20AO95235 890 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 CD2BP2O95400 341 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 LATS1O95835 1130 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 MPOP05164 745 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 POLR2EP19388 210 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 CD70P32970 193 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 SGSHP51688 502 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 ERVPABLB-1P60509 514 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 YWHAGP61981 247 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDX41-216ENST00000513562 DLG4P78352 724 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDX41-216ENST00000513562 VAC14Q08AM6 782 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 KNOP1Q1ED39 458 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 HNRNPA1L2Q32P51 320 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 SLC45A4Q5BKX6 768 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 RAB41Q5JT25 222 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 PPP1R26Q5T8A7 1209 aaPredicted RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 CDCP2Q5VXM1 449 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 SPATS2Q86XZ4 545 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 LSMEM2Q8N112 164 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 WFDC5Q8TCV5 224 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 KCNE4Q8WWG9 221 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 MED8Q96G25 268 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 DPH1Q9BZG8 443 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 CUEDC2Q9H467 287 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 CYP3A43Q9HB55 503 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
DDX41-216ENST00000513562 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.4□□□□□ -0.58
DDX41-216ENST00000513562 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 TRIM38O00635 465 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 LATO43561 262 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 SIGLEC6O43699 453 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 RNASEH1O60930 286 aaKnown RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 SLFN14P0C7P3 912 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 PIK3CAP42336 1068 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 CSRP3P50461 194 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 ADPRHP54922 357 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 GABREP78334 506 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 AMPD3Q01432 767 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 ZNF211Q13398 564 aaPredicted RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 ARID5BQ14865 1188 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 MPP7Q5T2T1 576 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 ADGRF1Q5T601 910 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 NAPEPLDQ6IQ20 393 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 FAM173BQ6P4H8 233 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 SV2AQ7L0J3 742 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 BHLHA9Q7RTU4 235 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 MMAAQ8IVH4 418 aaKnown RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 AADATQ8N5Z0 425 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 MFSD2AQ8NA29 543 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 KDM1BQ8NB78 822 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 GOLGA5Q8TBA6 731 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 TMEM174Q8WUU8 243 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 LMLNQ96KR4 655 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 BACH2Q9BYV9 841 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 UBXN6Q9BZV1 441 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 APOBEC3GQ9HC16 384 aaKnown RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
DDX41-216ENST00000513562 HBS1LQ9Y450 684 aaKnown RBP11.39□□□□□ -0.59
DDX41-216ENST00000513562 KNL1Q8NG31 2342 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 SPTA1P02549 2419 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 NUMA1Q14980 2115 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 UBR5O95071 2799 aaPredicted RBP11.38□□□□□ -0.59
DDX41-216ENST00000513562 KLK10O43240 276 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 CD58P19256 250 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 SLC8A1P32418 973 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 LSSP48449 732 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 ST8SIA6P61647 398 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 PPP2CBP62714 309 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms