RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 WT1P19544 449 aaPredicted RBP9.55□□□□□ -0.88
NUP54-211ENST00000512151 TGM2P21980 687 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 DGKAP23743 735 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 HLA-FP30511 346 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 CCR5P51681 352 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 MCM6Q14566 821 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 POSTNQ15063 836 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 DTHD1Q6ZMT9 781 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 USP30Q70CQ3 517 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 ADIPOR2Q86V24 386 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 OXR1Q8N573 874 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 HTR3CQ8WXA8 447 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 SLC25A18Q9H1K4 315 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 RSPH9Q9H1X1 276 aaPredicted RBP9.55□□□□□ -0.88
NUP54-211ENST00000512151 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
NUP54-211ENST00000512151 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 COMMD8Q9NX08 183 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 CA5BQ9Y2D0 317 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 PCDHGA8Q9Y5G5 932 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 CENPEQ02224 2701 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 H3BQV1 296 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 AP1G2O75843 785 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 TNFSF15O95150 251 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 GJB6O95452 261 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 CST3P01034 146 aaPredicted RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 HMBSP08397 361 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 RARGP13631 454 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 PDCP20941 246 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 CORO1AP31146 461 aaKnown RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 PRPHP41219 470 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 PLA2G4AP47712 749 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 CYP4F2P78329 520 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 ARID5AQ03989 594 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 C10orf120Q5SQS8 335 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 FOXD4L5Q5VV16 416 aaPredicted RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 FAM173BQ6P4H8 233 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 ZNF720Q7Z2F6 126 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 SFR1Q86XK3 245 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 FUKQ8N0W3 1084 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 MFSD2AQ8NA29 543 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 OR2T34Q8NGX1 318 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 ZNF564Q8TBZ8 553 aaPredicted RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 MAPK15Q8TD08 544 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 NOC3LQ8WTT2 800 aaKnown RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 FOXD4L4Q8WXT5 416 aaPredicted RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 ANKRD36BP1Q96IX9 119 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 APOLD1Q96LR9 279 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 CBWD1Q9BRT8 395 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 MED10Q9BTT4 135 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 FUCA2Q9BTY2 467 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 PCIF1Q9H4Z3 704 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 FBRSQ9HAH7 460 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.54□□□□□ -0.88
NUP54-211ENST00000512151 GEMIN8Q9NWZ8 242 aaKnown RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 AGO1Q9UL18 857 aaKnown RBP9.54□□□□□ -0.88
NUP54-211ENST00000512151 PLAAQ9Y263 795 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 KIF3AQ9Y496 699 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 RP1P56715 2156 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 LRBAP50851 2863 aa9.54□□□□□ -0.88
NUP54-211ENST00000512151 VWA3AA6NCI4 1184 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 LRRC72A6NJI9 287 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 A8MXQ7 604 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 ZSCAN22P10073 491 aaPredicted RBP9.53□□□□□ -0.88
NUP54-211ENST00000512151 SFTPCP11686 197 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 HOXD9P28356 352 aaPredicted RBP9.53□□□□□ -0.88
NUP54-211ENST00000512151 AFMP43652 599 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 MCTP1Q6DN14 999 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 NAPEPLDQ6IQ20 393 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 KLHDC10Q6PID8 442 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 CHST9Q7L1S5 443 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 SCD5Q86SK9 330 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 AADATQ8N5Z0 425 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 ARRDC3Q96B67 414 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 MYO19Q96H55 970 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 SLC2A11Q9BYW1 496 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
NUP54-211ENST00000512151 ARHGAP20Q9P2F6 1191 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 NOL7Q9UMY1 257 aaKnown RBP9.53□□□□□ -0.88
NUP54-211ENST00000512151 SCML2Q9UQR0 700 aa9.53□□□□□ -0.88
NUP54-211ENST00000512151 HHLA1C9JL84 531 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 LATO43561 262 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 SIN3BO75182 1162 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 TBCAO75347 108 aaKnown RBP9.52□□□□□ -0.88
NUP54-211ENST00000512151 RNASEH2AO75792 299 aaKnown RBP9.52□□□□□ -0.88
NUP54-211ENST00000512151 F13A1P00488 732 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 TNNC2P02585 160 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 GP1BAP07359 652 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 THEGLP0DJG4 465 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 CCDC130P13994 396 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 CHKAP35790 457 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 CASRP41180 1078 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms