RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 ACSS3Q9H6R3 686 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TMEM120BA0PK00 339 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 MTMR11A4FU01 709 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 PPP1R12AO14974 1030 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TRIM66O15016 1216 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 HOXA2O43364 376 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 PAGE1O75459 146 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TPSB2P20231 275 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 MAGEA3P43357 314 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 MAGEA11P43364 429 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TPSAB1Q15661 275 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 PKN2Q16513 984 aaKnown RBP16.64■□□□□ 0.25
CLDND1-222ENST00000510545 RNF19BQ6ZMZ0 732 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 ZNF567Q8N184 647 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 COLGALT1Q8NBJ5 622 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 CCT8L2Q96SF2 557 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TRIM56Q9BRZ2 755 aaKnown RBP16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TMEM175Q9BSA9 504 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 MRPL9Q9BYD2 267 aaKnown RBP16.64■□□□□ 0.25
CLDND1-222ENST00000510545 CRISPLD2Q9H0B8 497 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 GMIPQ9P107 970 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
CLDND1-222ENST00000510545 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
CLDND1-222ENST00000510545 TCRBV9S1A1TA0A576 114 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 SRRM3A6NNA2 597 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-222ENST00000510545 SRGAP2BP0DMP2 458 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 BRAFP15056 766 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 CPB1P15086 417 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 PHBP35232 272 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 CCT5P48643 541 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-222ENST00000510545 TRABD2AQ86V40 505 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 MON1AQ86VX9 555 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 MPP5Q8N3R9 675 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 DHRS4Q9BTZ2 278 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 BEGAINQ9BUH8 593 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 INTS9Q9NV88 658 aaKnown RBP16.63■□□□□ 0.25
CLDND1-222ENST00000510545 IL37Q9NZH6 218 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 GMNCA6NCL1 334 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 RASA4BC9J798 803 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 NDUFAB1O14561 156 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 RASA4O43374 803 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 GEMIN4P57678 1058 aaKnown RBP16.63■□□□□ 0.25
CLDND1-222ENST00000510545 GPR17Q13304 367 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 BRMS1LQ5PSV4 323 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 CFAP36Q96G28 342 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 CELF6Q96J87 481 aaKnown RBP16.63■□□□□ 0.25
CLDND1-222ENST00000510545 SIGLEC10Q96LC7 697 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 TOX2Q96NM4 488 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 FRMD8Q9BZ67 464 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-222ENST00000510545 FAM107BQ9H098 131 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 SLC24A2Q9UI40 661 aa16.63■□□□□ 0.25
CLDND1-222ENST00000510545 PLXNA3P51805 1871 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 ADAM12O43184 909 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 OPHN1O60890 802 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 C1QAP02745 245 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 TSHRP16473 764 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PTPN3P26045 913 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PSMB4P28070 264 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 CCR1P32246 355 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PPIDQ08752 370 aaKnown RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 GALNT2Q10471 571 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 LRRC14Q15048 493 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 RWDD4Q6NW29 188 aaKnown RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PDZD4Q76G19 769 aaPredicted RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PRPF39Q86UA1 669 aaKnown RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 LRRC43Q8N309 656 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 HAPLN3Q96S86 360 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PAFAH2Q99487 392 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 PRMT1Q99873 361 aaKnown RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 VN1R3Q9BXE9 311 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 MLXIPLQ9NP71 852 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 KCNK9Q9NPC2 374 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
CLDND1-222ENST00000510545 LAMA2P24043 3122 aaKnown RBP16.62■□□□□ 0.25
CLDND1-222ENST00000510545 FAM92AA1XBS5 289 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 KCNU1A8MYU2 1149 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 TBX18O95935 607 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 FAM107AO95990 144 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 FDFT1P37268 417 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 ZNF135P52742 658 aaPredicted RBP16.61■□□□□ 0.25
CLDND1-222ENST00000510545 RASA2Q15283 850 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 MANEALQ5VSG8 457 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 ZNF473Q8WTR7 871 aaKnown RBP16.61■□□□□ 0.25
CLDND1-222ENST00000510545 FCRL2Q96LA5 508 aaPredicted RBP16.61■□□□□ 0.25
CLDND1-222ENST00000510545 SEPT5Q99719 369 aaPredicted RBP16.61■□□□□ 0.25
CLDND1-222ENST00000510545 GORASP1Q9BQQ3 440 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 PSMC3IPQ9P2W1 217 aaPredicted RBP16.61■□□□□ 0.25
CLDND1-222ENST00000510545 FETUBQ9UGM5 382 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 A0A1W2PPM1 405 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 EFEMP2O95967 443 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 MOCS2O96007 188 aaPredicted RBP16.61■□□□□ 0.25
CLDND1-222ENST00000510545 IFNAR2P48551 515 aa16.61■□□□□ 0.25
CLDND1-222ENST00000510545 DUSP4Q13115 394 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms