RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, human

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-211	ENST00000510171	USP30	Q70CQ3	517 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	SIX6OS1	Q8N1H7	587 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	GUF1	Q8N442	669 aa	Known RBP	10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	ZNF557	Q8N988	423 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	CCDC34	Q96HJ3	373 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	DCBLD2	Q96PD2	775 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	ORAI3	Q9BRQ5	295 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	IRX2	Q9BZI1	471 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	PABPC3	Q9H361	631 aa	Known RBP	10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	ABCC13	Q9NSE7	274 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	FBXL12	Q9NXK8	326 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	TSPAN16	Q9UKR8	245 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	SCML1	Q9UN30	329 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	PCDHGA1	Q9Y5H4	931 aa		10.84	□□□□□ -0.67
DDX41-211	ENST00000510171	FASN	P49327	2511 aa	Known RBP	10.83	□□□□□ -0.68
DDX41-211	ENST00000510171		A0A1B0GTQ1	180 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	GOLGA6L7	A0A1B0GV03	622 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171		A0A1W2PPC4	97 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	YJEFN3	A6XGL0	299 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171		E7ENQ6	273 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	ENC1	O14682	589 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	IRAK2	O43187	625 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	MSI1	O43347	362 aa	Known RBP	10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	TBL1X	O60907	577 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	LDOC1	O95751	146 aa	Predicted RBP	10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	ITGAV	P06756	1048 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	CDK4	P11802	303 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	CD70	P32970	193 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	MXI1	P50539	228 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	SGSH	P51688	502 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	NDUFA8	P51970	172 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	GALC	P54803	685 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	ADIG	Q0VDE8	80 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	BST2	Q10589	180 aa	Known RBP	10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	SGO2	Q562F6	1265 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	PRAMEF14	Q5SWL7	426 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	PIK3R6	Q5UE93	754 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	RFWD3	Q6PCD5	774 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	GATAD2A	Q86YP4	633 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	UNC45B	Q8IWX7	931 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	UBA3	Q8TBC4	463 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	KCTD13	Q8WZ19	329 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	TTC17	Q96AE7	1141 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	EEF2KMT	Q96G04	330 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	SLC6A18	Q96N87	628 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	ELF4	Q99607	663 aa	Predicted RBP	10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	MTG2	Q9H4K7	406 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	CNGB3	Q9NQW8	809 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	STIM2	Q9P246	746 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	KIAA1257	Q9ULG3	409 aa		10.83	□□□□□ -0.68
DDX41-211	ENST00000510171	LRRC72	A6NJI9	287 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	PLK4	O00444	970 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	CETN3	O15182	167 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	C1S	P09871	688 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	PRR29	P0C7W0	189 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	EPB41	P11171	864 aa	Known RBP	10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	VDR	P11473	427 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	LCP1	P13796	627 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	CD19	P15391	556 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	ABCB4	P21439	1286 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	ABCG1	P45844	678 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	YWHAE	P62258	255 aa	Known RBP	10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	DPYD	Q12882	1025 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	BECN1	Q14457	450 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	EDRF1	Q3B7T1	1238 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	C6orf118	Q5T5N4	469 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	NUGGC	Q68CJ6	796 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	NCEH1	Q6PIU2	408 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	KRBA2	Q6ZNG9	492 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	MFN1	Q8IWA4	741 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	SCML4	Q8N228	414 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	FIBIN	Q8TAL6	211 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	WFDC5	Q8TCV5	224 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	AZIN2	Q96A70	460 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	CRELD1	Q96HD1	420 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	CNDP2	Q96KP4	475 aa	Known RBP	10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	UBL7	Q96S82	380 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	DDX50	Q9BQ39	737 aa	Known RBP	10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	NEUROG2	Q9H2A3	272 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	AASDHPPT	Q9NRN7	309 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	AK5	Q9Y6K8	562 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	ADAMTS20	P59510	1910 aa		10.82	□□□□□ -0.68
DDX41-211	ENST00000510171	FREM2	Q5SZK8	3169 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171		A0A1W2PP55	124 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	MID1	O15344	667 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	YKT6	O15498	198 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	ACSL4	O60488	711 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	SIN3B	O75182	1162 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	RFPL3	O75679	317 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	RNASEH2A	O75792	299 aa	Known RBP	10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	IGLV3-27	P01718	113 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	ASL	P04424	464 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	WNT1	P04628	370 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	SETSIP	P0DME0	302 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	SLC6A4	P31645	630 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	SLC8A1	P32418	973 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	HNF1B	P35680	557 aa		10.81	□□□□□ -0.68
DDX41-211	ENST00000510171	CSK	P41240	450 aa		10.81	□□□□□ -0.68

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