RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 C4orf32Q8N8J7 132 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 MMTAG2Q9BU76 263 aaKnown RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 DMAP1Q9NPF5 467 aaPredicted RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 COMMD8Q9NX08 183 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 OSER1Q9NX31 292 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 SEPT10Q9P0V9 454 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 ZNF510Q9Y2H8 683 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 PLD2O14939 933 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 PFKFB2O60825 505 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 CYBBP04839 570 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 TMEM191BP0C7N4 346 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 COL8A1P27658 744 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 HLA-FP30511 346 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 ABCD1P33897 745 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
SNF8-207ENST00000509995 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 ZNF131P52739 623 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 EHHADHQ08426 723 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
SNF8-207ENST00000509995 CST6Q15828 149 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 ARSHQ5FYA8 562 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 JAMLQ86YT9 394 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 B3GALNT2Q8NCR0 500 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 OR6B3Q8NGW1 331 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 TPCN2Q8NHX9 752 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 WFIKKN2Q8TEU8 576 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 OMDQ99983 421 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 FAM213AQ9BRX8 229 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 SNX25Q9H3E2 840 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 RBAKQ9NYW8 714 aaPredicted RBP11.29□□□□□ -0.6
SNF8-207ENST00000509995 NAV3Q8IVL0 2385 aa11.29□□□□□ -0.6
SNF8-207ENST00000509995 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.28□□□□□ -0.6
SNF8-207ENST00000509995 MTSS1O43312 755 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 PIAS2O75928 621 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 PLA2G4BP0C869 781 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 ZNF177Q13360 481 aaPredicted RBP11.28□□□□□ -0.6
SNF8-207ENST00000509995 TRIM29Q14134 588 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 ESPL1Q14674 2120 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 CDKN3Q16667 212 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 HYIQ5T013 277 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 GUSBP11Q6P575 273 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 CHST9Q7L1S5 443 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 ZSWIM2Q8NEG5 633 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 OR14C36Q8NHC7 312 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 DDI1Q8WTU0 396 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 DUSP23Q9BVJ7 150 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 IKZF4Q9H2S9 585 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 MTG2Q9H4K7 406 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 FBXO44Q9H4M3 255 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 ARHGAP20Q9P2F6 1191 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 NUDT5Q9UKK9 219 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 R3HCC1Q9Y3T6 440 aaKnown RBP11.28□□□□□ -0.6
SNF8-207ENST00000509995 ATP8B3O60423 1300 aa11.28□□□□□ -0.6
SNF8-207ENST00000509995 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 K7ESM1 405 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 RNASEH1O60930 286 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 TACC1O75410 805 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 FAM13AO94988 1023 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 DLDP09622 509 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 HOXD9P28356 352 aaPredicted RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 CORO1AP31146 461 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 STAT4Q14765 748 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 POSTNQ15063 836 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 C10orf120Q5SQS8 335 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 CRTC1Q6UUV9 634 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 EFL1Q7Z2Z2 1120 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 MAMDC2Q7Z304 686 aaPredicted RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 PRPF39Q86UA1 669 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 ADIPOR2Q86V24 386 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 ZC3H3Q8IXZ2 948 aaKnown RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 AADATQ8N5Z0 425 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 C9orf43Q8TAL5 461 aaPredicted RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 SAAL1Q96ER3 474 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 SMARCD1Q96GM5 515 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 CAAP1Q9H8G2 361 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 ZNF71Q9NQZ8 489 aaPredicted RBP11.27□□□□□ -0.61
SNF8-207ENST00000509995 KRT82Q9NSB4 513 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 KLHL11Q9NVR0 708 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNF8-207ENST00000509995 APCP25054 2843 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 UBE4BO95155 1302 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 SDK2Q58EX2 2172 aa11.27□□□□□ -0.61
SNF8-207ENST00000509995 CPED1A4D0V7 1026 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms