RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAM71AQ8IYT1 594 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 LGI2Q8N0V4 545 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 AHI1Q8N157 1196 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 HJURPQ8NCD3 748 aaPredicted RBP15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 WFIKKN2Q8TEU8 576 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 RNF34Q969K3 372 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 SLC39A13Q96H72 371 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 NOX5Q96PH1 765 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 FSCN3Q9NQT6 498 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 DDIT4Q9NX09 232 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 NDUFS2O75306 463 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 ZNF217O75362 1048 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 CFIP05156 583 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 IRX4P78413 519 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 NME3Q13232 169 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 NNTQ13423 1086 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 CDH18Q13634 790 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 ENPP2Q13822 863 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 KRT31Q15323 416 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 TRIM61Q5EBN2 209 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 MS4A13Q5J8X5 152 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 EFHC1Q5JVL4 640 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 SLC36A4Q6YBV0 504 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 CIR1Q86X95 450 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 TMPRSS6Q8IU80 811 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 ENOX1Q8TC92 643 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 HSPA12BQ96MM6 686 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 DDX50Q9BQ39 737 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 LHX5Q9H2C1 402 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 FANCLQ9NW38 375 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 PLA2G4CQ9UP65 541 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 CEP83Q9Y592 693 aa15.35■□□□□ 0.05
UBE2D3-228ENST00000508974 SPTBN2O15020 2390 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 PI4KAP42356 2102 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 NPC1O15118 1278 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 TIMM44O43615 452 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 HSF2BPO75031 334 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 UCHL3P15374 230 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 CYP11B1P15538 503 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 POLR2EP19388 210 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 TACR2P21452 398 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 MAPK8P45983 427 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 COPAP53621 1224 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 LIMK1P53667 647 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 CDK17Q00537 523 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 ZNF33AQ06730 810 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 LMAN2Q12907 356 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 C2CD6Q53TS8 623 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 FSCBQ5H9T9 825 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 CT47A1Q5JQC4 288 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 CDKAL1Q5VV42 579 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 OLFML1Q6UWY5 402 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 RBM43Q6ZSC3 357 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 BEND5Q7L4P6 421 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 FAM124AQ86V42 546 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 SYT12Q8IV01 421 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 SLC41A1Q8IVJ1 513 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 CCDC117Q8IWD4 279 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 PRCCQ92733 491 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 AZIN2Q96A70 460 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 SIPA1Q96FS4 1042 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 SLC2A13Q96QE2 648 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 MTG2Q9H4K7 406 aa15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 FAM207AQ9NSI2 230 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-228ENST00000508974 GON4LQ3T8J9 2241 aa15.33■□□□□ 0.05
UBE2D3-228ENST00000508974 F8VZ95 297 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 H0Y626 953 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 DAB1O75553 588 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 IGLV3-25P01717 112 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 ATP5BP06576 529 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 TPM2P07951 284 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 ACADMP11310 421 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 GGCXP38435 758 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 TPMTP51580 245 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 BPIFB4P59827 614 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 SLC6A3Q01959 620 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 STX1AQ16623 288 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 PTPRNQ16849 979 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 UAP1L1Q3KQV9 507 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 MPP7Q5T2T1 576 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 KIAA0907Q7Z7F0 614 aaPredicted RBP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 NOP9Q86U38 636 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 RGL4Q8IZJ4 473 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 ATP6V0D2Q8N8Y2 350 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 TMEM35BQ8NCS4 154 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 FIBINQ8TAL6 211 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 TOE1Q96GM8 510 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 BTN2A3PQ96KV6 586 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 GPR174Q9BXC1 333 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 NAA15Q9BXJ9 866 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 NUSAP1Q9BXS6 441 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 NLRC4Q9NPP4 1024 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 PILRBQ9UKJ0 227 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 NCOR2Q9Y618 2525 aa15.33■□□□□ 0.04
UBE2D3-228ENST00000508974 KCNU1A8MYU2 1149 aa15.32■□□□□ 0.04
UBE2D3-228ENST00000508974 F5H5T6 163 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms